Parageobacillus sp. KH3-4: PspKH34_33840
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Entry
PspKH34_33840 CDS
T08468
Symbol
yfjP
Name
(GenBank) putative DNA-3-methyladenine glycosylase YfjP
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PspKH34_33840 (yfjP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_33840 (yfjP)
Enzymes [BR:
parg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PspKH34_33840 (yfjP)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PspKH34_33840 (yfjP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BDG48823
LinkDB
All DBs
Position
complement(3363377..3364243)
Genome browser
AA seq
288 aa
AA seq
DB search
MWQQRVDVAPPYNFSHALARLALDPLISMDIAQQKVVVPLYIQNKPIAVTVESIGTKDEP
SFLVTAPYPERKHEIMERISHLFQWNTPLALIHEHFQRTELQPLFVEYEGMPLILDFDLY
FCLMKCLIHQQLNLKVASRLTERFVQTFGTQIDGVWFYPRPEDIAALSYDELKQLQLSGR
KAEYIIDASRLIAEGKLSLEELARKSEAEVMEVLLSVRGIGPWTVQNFLLFGLGKRNVFP
KADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaacagcgagtggatgtcgctccgccgtataatttttcccatgctttggcgcgg
cttgcgctcgatcccctcatatcgatggacatagcgcaacagaaagtcgttgttccgctt
tatatacagaataagccaatcgctgtgactgttgaaagcatcgggacaaaggatgaaccg
agctttcttgtgacagcgccatacccagaacgaaaacatgaaattatggagcggatttcc
catctgtttcaatggaatacaccgcttgccctgattcatgaacattttcagcggactgaa
ttacaaccgctttttgtcgaatatgaaggaatgccgcttattttagattttgacctttat
ttttgtttaatgaaatgcctgattcaccagcagttaaatttgaaagttgcttcccgcctg
acggagcgttttgtgcaaacgttcggaacgcaaatcgatggcgtttggttttatccgagg
ccggaagacattgccgcactttcctatgatgaactgaaacagctgcagttaagcgggcga
aaagcggagtatatcatcgatgcatcccggctcattgccgaagggaagctgtcattggag
gaactcgcgcgcaaaagcgaagcggaagtgatggaagtcttgttgtcggttcgcggcatc
ggtccatggacggtgcaaaatttccttctgtttgggcttggaaaacgaaacgtgtttcca
aaggcggacattggcttgcagcgggcggtccagcgcctccttggtctttcggaaaggccg
tcgatgaaacaaatggaagagctaagcaagcgctgggagccatatttaagctacgcatcg
ttatatttatggagaagcatcgaatga
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