Parageobacillus sp. KH3-4: PspKH34_36190
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Entry
PspKH34_36190 CDS
T08468
Symbol
yrvJ
Name
(GenBank) putative N-acetylmuramoyl-L-alanine amidase YrvJ
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PspKH34_36190 (yrvJ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
PspKH34_36190 (yrvJ)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
parg03036
]
PspKH34_36190 (yrvJ)
Enzymes [BR:
parg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
PspKH34_36190 (yrvJ)
Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
Peptidoglycan biosynthesis and degradation
Amidase
PspKH34_36190 (yrvJ)
Chromosome and associated proteins [BR:
parg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PspKH34_36190 (yrvJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_3
Amidase_3
SH3_4
SH3_16
SH3_1
SH3_2
GW
Motif
Other DBs
NCBI-ProteinID:
BDG49058
LinkDB
All DBs
Position
complement(3615236..3616675)
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AA seq
479 aa
AA seq
DB search
MCLRWMRLLLFLFCLSMVVGMVLPVLAAKNERQTVVVTAKEVNVRQGPGMSYRLLAKVHQ
GETYQLIEERAGWVKVQMKRNQTGWVAKTYTKLVLEQAVSQEDRLRVRLSPSRDGRIVGH
LSKGEVVSVLETNGDWRKVVTSSLIGWVSSSYLSSYHRKEATAKTGWVTADSLNVRARPS
LTAERVGKVTYGEQVTITDKQENWYQILMNNGKVGWVSSEYISTASKTASSFVTVLYPNV
NIRALPSLGSPIQAMAQYGERYRVLGKIGNWYEIEIPKQGIGYIAGWLVSVGVDGQSEAS
TLKGKTVVIDAGHGGKDSGTISNTGIMEKTLTLRTARLLKEKLQTQGANVVLTRSSDRYV
SLSERVQTAYHYRADAFISIHYDSAKDQHAKGATVYYYDMFSDYLLALSLERPFSRMMTI
PFRGVSFGNYYVLRENELPSVLVELGYLSNPAEASIVAAEHYQQEAANAIVNGLRNYFE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtttgcggtggatgagactgctattatttttgttttgcctctccatggttgtgggg
atggtgctgccggtgcttgcggcaaaaaacgagaggcagacggtagtcgttacagcaaag
gaagtgaacgttcgccaagggccgggaatgtcgtaccgtttgttggcaaaagtccaccaa
ggggaaacgtatcagctgatcgaggaacgggccggttgggtcaaagtgcaaatgaaacga
aatcaaacggggtgggtggcgaaaacgtatactaagcttgttcttgagcaggcggtctct
caggaagatcggttgcgggtgcgcctctcgcctagccgtgatgggcgtatcgtcggacat
ttgtccaagggagaagtcgtctccgtgttagaaacgaacggggactggaggaaggtcgtc
acctcttcgcttattggctgggtttcctcttcttatctctcctcgtatcatcgcaaggaa
gcgacggcgaaaactggatgggtaacggcagattcgctcaatgtgcgggcgcggccgtca
ctgacggcggaacgggttggaaaagtaacctatggggagcaggtaaccattacggacaag
caagaaaattggtatcaaatcttgatgaataacggcaaagtaggctgggtgtccagtgaa
tatatttctactgcttcgaagacagcgtcttcttttgtgaccgtattgtatcctaatgta
aatatccgtgcgcttccgtcccttggaagccctatccaggcgatggcgcaatacggtgag
cgttaccgcgtgcttgggaaaatcggcaattggtatgaaattgaaattccaaagcaggga
attggttatattgccggctggcttgtttccgttggcgtcgatggccaatcagaggctagc
acattaaaaggaaaaacggtcgtgatcgatgccgggcacggcggcaaagacagcggcacc
attagcaatacagggatcatggaaaaaacgctgacattgcggacggcgcggcttctaaaa
gaaaagctgcaaacgcaaggggcaaacgtcgttctgacgcgctcgagcgatcgttacgtt
tcattgtctgaacgcgtacaaacggcgtatcactaccgcgctgatgcgtttattagtatt
cattatgatagcgcgaaggatcaacatgccaaaggagcgactgtatattactatgatatg
ttttccgattatttgcttgcgttgtcgcttgaacgtccgttttcccgcatgatgacgatt
ccgttccgcggggtgagctttggaaattattacgttctccgcgaaaacgaacttccgtct
gtattagtggaactaggatatttaagcaatccggcagaagcgagtatcgtggctgcagag
cattaccagcaggaagcggcaaacgcgattgtcaatggccttcgcaattattttgaatga
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