Priestia aryabhattai: I5S86_03315
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Entry
I5S86_03315 CDS
T07135
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
parh
Priestia aryabhattai
Pathway
parh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5S86_03315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parh03019
]
I5S86_03315
Enzymes [BR:
parh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I5S86_03315
Messenger RNA biogenesis [BR:
parh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I5S86_03315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QPN45947
LinkDB
All DBs
Position
complement(723242..725152)
Genome browser
AA seq
636 aa
AA seq
DB search
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMN
PQIQAIAKGVDVLVACPGRLLDLAGQGRVDLAHVEILVLDEADRMLDMGFIHDVKKVLAR
LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL
AHLITLGAWEQVLVFTRTKHGANRLAEYLEKHGLSAAAIHGNKSQNARTKALADFKANSV
RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKSIERVTRQKIADGDLMGFDPSQVEAEKPEVRERPQNNGRGGRNQQARGDGGKDGSGGR
KDKGKDKGKAKQQAADKPADKEKSADKQQQPRKPRDKKPRQQQASQNTVPKAPADRAPDE
FLDDEIDNFGNRADYVSPYQNAKNQGRNRRPGANAGAGQGQANPGRSNSGGSNSGGGQGR
NGGQPRSASGEKRPPRNNKGGDARRDSNGGGRNRSAGRDDASRQEPAVRSSREPQNQPVI
IRKESKLDRFPTPEQLEDLPSRPRGERPALLTRKGG
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggcacttgtccgcgctatcgaggctgcgggc
tatacccagccgactccggtgcaacagcgggcgattcccgccgtgttgcaaggccgcgac
ctgatggtcgccgcacagacaggtactggtaaaaccggcggtttcgccctaccgatcctt
gagcgcctgttcccggcaggccacccggacaaatcccagcgccacggcccgcgccaaccg
cgcgtgctggtcctgaccccgacccgcgaactggcggctcaggtacacgacagcttcaag
gtttacgctcgcgacctgccgctggtcagtgcctgcattttcggcggcgttggcatgaac
ccgcaaatccaggccattgccaagggtgtcgacgtcctggtggcctgcccgggccgtctg
ctcgacctggcagggcaaggccgcgtcgacctggcccacgtggaaatcctggtcctggac
gaagccgaccgcatgctcgacatgggcttcatccacgacgtcaagaaggtcctcgcccgc
ctgccggccaaacggcagaacctgctgttctcggcgacgttctccaaagacatcaccgac
ctggccgacaagctcctgcacaaccctgagcgcatcgaggtcaccccaccgaacaccacc
gtcgagcgtatcgagcagcgcgtctaccgcctgcccgccagccacaagcgcgcgctgctg
gcgcacctgatcacgctcggcgcctgggagcaggtactggtattcacccgtaccaagcac
ggtgccaaccgtctggccgagtacctggaaaagcacggcctgagcgccgcggccatccac
ggcaacaagagccagaacgctcgtaccaaggcactggccgacttcaaggccaacagcgta
cgcgtactggtcgccaccgacattgccgcccgtggtctggacatcgaccaactgccgcat
gtggtcaacttcgaactgcccaatgtcgaagaagactacgttcaccgtatcggccgcacc
ggccgtgccggccgctcgggcgaggccatttccctggtcgcgccggacgaagaaaaactg
ctcaagagcattgagcgggtcaccaggcagaagatcgccgatggcgacctgatgggcttc
gacccaagccaggtggaggccgagaagcctgaggtgcgtgaacgcccgcagaacaacggt
cgcggcggccgcaatcagcaggcccgtggtgacggtggcaaagatggcagtggcggccgc
aaggacaagggcaaggataaaggcaaggccaagcagcaggccgccgacaagcctgccgac
aaggaaaagtccgccgacaagcagcaacagccgcgcaagccgcgtgacaagaagccgcgc
caacagcaagccagccagaacactgtacctaaggcaccggccgaccgtgctccggatgaa
ttcctggacgacgaaatcgacaacttcggtaaccgtgccgactacgtcagcccctaccag
aatgccaagaaccagggccgcaaccgtcgcccgggtgccaatgccggcgctggtcaaggc
caggccaaccctgggcgcagcaacagtggtggcagcaacagtggaggtggccaagggcgt
aacggcggccagccgcgcagcgccagtggcgagaaacgcccgccgcgcaacaacaaggga
ggtgatgcgcgccgcgatagcaacggtggtggccgcaaccgttcggccggccgtgatgac
gcatcccgtcaggagccggcagtacgtagctcgcgagagccgcaaaaccagcctgtgatc
atccgcaaggaatccaagctcgaccgtttcccaacgcctgagcaactggaagacctgcca
agccgcccacgtggtgagcggcctgcgttactgacccgcaaaggcggctaa
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