Priestia aryabhattai: I5S86_06065
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Entry
I5S86_06065 CDS
T07135
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
parh
Priestia aryabhattai
Pathway
parh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I5S86_06065 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parh03400
]
I5S86_06065 (sbcB)
Enzymes [BR:
parh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
I5S86_06065 (sbcB)
DNA repair and recombination proteins [BR:
parh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I5S86_06065 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I5S86_06065 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I5S86_06065 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QPN46461
LinkDB
All DBs
Position
1324717..1326153
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AA seq
478 aa
AA seq
DB search
MTSSIFWHDYETTGINPRCDRPLQVAGVRTDFELNEIDEPISLYCRPSDDILPHPAACLV
TGITPQQLASQGLCEAEFMTRVHAQLALPGTCGAGYNTLRFDDEVTRYSLYRNFFDPYAR
EWQGGNSRWDLIDVVRTAYALRPDGIVWPQQDGRTSLRLELLSKANGIEHGHAHEALSDV
RATIALARLIRHKQPKLYEWLFQLRSKHKVMEQIRLLQPLVHISGRFSAARNYLGVVLPL
AWHPRNRNALIVCDLQQETLPLLRESAEVLRERLYTRREELSDGQLPIPLKLVQINRCPV
VAPLSVLRAPDQQRLGIDLALVQSRAEELANQQNAWQHKLEHIYGKDDFVPSDDPEQQLY
EGFLGDRDRRLCEQVRTLDPAQLGQGHWMFDDPRMPELLFRYRARNFPETLNSEERQRWY
GFCQQRLSDPHWGAPNTLGDFEQARQSAWANADEAGRQVLDAWQAHARQLAEQFAISV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgacctctagcattttctggcacgactacgaaaccaccggtatcaacccgcgctgcgac
aggccgttgcaggtggccggagtgcgcaccgacttcgagctcaatgagatcgacgagccg
atcagtctttattgccgccccagcgacgatatcctgccgcacccggcggcctgcctggtg
acgggtatcaccccgcagcaactggccagccaaggcctgtgcgaagccgagttcatgacg
cgggtgcacgcgcaactggccctcccggggacctgcggcgccggttacaacaccttgcgc
ttcgacgacgaggttacccgctacagcctgtaccgcaacttcttcgacccctatgcccgg
gagtggcagggcggcaatagccgctgggacttgatcgatgtggtacgcactgcttatgcc
cttcgccctgacggcatcgtctggccgcaacaggacgggcgcaccagcctgcgccttgaa
ctgctcagcaaggccaatggcatcgagcatgggcatgcacacgaggcactttccgacgtg
cgggccaccatcgcactggcgcgtttgatccggcacaagcaacccaagttgtatgagtgg
ctgttccagttgcgcagcaagcacaaagtgatggagcaaatccgtctgctgcagccgttg
gtgcatatatcggggcggttctcggcggcgcgcaattatctgggggtggtcttgcctttg
gcctggcacccacgtaatcgcaacgcgctgattgtgtgcgacctgcaacaggaaacccta
cccttattaagggaaagtgccgaggtgcttcgtgaacgcttgtacacgcgtcgtgaggaa
ttgtctgacgggcaattacccataccgctgaagttggtgcagatcaatcgctgcccggta
gtggcgccgctctcggtattgcgcgcgcccgatcagcaacggctcggtatcgatttggcg
ctcgtgcaatcacgcgctgaagagttggccaatcaacagaatgcttggcaacacaagctg
gaacacatttacggcaaggacgactttgttccgagtgacgatccggaacagcaattgtat
gaagggtttctcggcgaccgcgaccgccggctgtgcgaacaagtaagaacgctggaccct
gcacagttggggcaaggccactggatgttcgatgacccgcgcatgcctgagttgttgttc
cggtatcgggcgcgcaacttcccggaaaccttgaatagcgaagagcggcaacgctggtat
ggtttctgccagcagcggctgagcgatccgcattggggggcacccaacacgctgggtgac
ttcgagcaggcgcgccaaagcgcctgggccaacgcggacgaggccgggcgtcaggtgctg
gatgcctggcaggcgcatgcccgacaactggcggagcagtttgccatcagtgtttga
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