Priestia aryabhattai: I5S86_08210
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Entry
I5S86_08210 CDS
T07135
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
parh
Priestia aryabhattai
Pathway
parh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5S86_08210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parh03019
]
I5S86_08210
03009 Ribosome biogenesis [BR:
parh03009
]
I5S86_08210
Enzymes [BR:
parh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I5S86_08210
Messenger RNA biogenesis [BR:
parh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I5S86_08210
Ribosome biogenesis [BR:
parh03009
]
Prokaryotic type
rRNA helicases
I5S86_08210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QPN46867
LinkDB
All DBs
Position
1798986..1800665
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AA seq
559 aa
AA seq
DB search
MTQETGGFAALDLNPNIVAAVLATGYEEPSAIQHQSIPIILAGHDMIGQAQTGTGKTAAF
ALPILNKIDVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLR
AIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPAS
RQTVLFSATLPSSIRSIAERHLREPKHVKIQSKTQTVTAIDQAHLMVHADQKIPAVLRLL
EVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEARLPNAQAVLDARIKKLTSSLAPLVAEAEATHGELFDRLTDALGCSPRAL
SAALLRKATNGQALDLAAVEREQPLVPSFAPRGERPERGDRAERSDRGERERRAPLPLAE
GRVRCRTALGARDGIAAKNLLGAILNEGGLARDAIGRIQVRDSFSLVELPEDGLERLLTK
LKDTRVAGKQLKLRRYRED
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggattcgccgctctcgatctcaatccgaatatcgttgctgct
gttctggccaccggctacgaagagccttcggctattcagcatcaatcgatcccgatcatc
ctcgccggtcacgacatgatcggccaggcgcagactggcaccggcaagaccgctgccttc
gccctgccgatcctcaacaagatcgacgtgagcaagcgcgaaccgcaagccctgatactg
gcgccaacccgtgagttggcgctgcaagtagccaccgctttcgaaacctacgccaagcag
atgccgggcgttaatgtggtggctgtatacggtggtgccccgatgggcccacagctgcgt
gccattcgcaacggcgcgcaaatcgtcgtggccaccccgggccgtctgtgcgaccacctg
cgtcgcgacgagaaagtcctgtccaccgtgcagtacctggtgctggacgaagccgacgaa
atgctcaagctgggcttcatggatgacctcgaagtgatcttcgatgccatcccggccagc
cgtcagaccgtactgttctccgctaccctgccgtcgtcgatccgctcgatcgccgaacgt
cacctgcgtgaacccaagcacgtcaagatccagagcaagacccagaccgtcaccgcgatc
gaccaggctcacctgatggtgcacgccgaccagaagatcccggctgttctgcgtttgctg
gaagtggaagagttcgacgcgctgatcgccttcgtgcgtaccaagcaagccaccctggac
ctggccgccgccctggaagccaaaggctacaaggctgctgcgctgaacggcgacatcgcc
cagaaccagcgtgagcgcgtcatcgactcgctcaaggatggccgcctggacatcgtcgtc
gccactgacgtcgctgcccgtggtctggacgtaccgcgcatcacccacgtgttcaacgtg
gacatgccgtacgacccggagtcctacgtgcaccgtatcggccgtaccggccgtgccggt
cgcgaaggccgtgcactgctgctggtcaccccgcgtgagcgccgcatgctgcaggtcatc
gagcgcgttaccgggcagaaggttgccgaagcgcgcctgccgaacgctcaggccgtgctg
gatgcgcgcatcaagaagctgacctcgagcctggcgccgctggtagccgaagcagaagcc
acccacggtgaactgttcgaccgcctgaccgacgccctgggttgcagcccgcgtgccctg
tctgcagcactgctgcgcaaggccaccaatggccaggcgctggacctggcagcggtagag
cgcgagcagccgctggtaccaagcttcgcaccgcgcggtgagcgcccggagcgtggtgac
cgtgccgagcgtagcgaccgtggtgagcgcgagcgtcgtgcgccactgccgctggccgaa
ggccgcgtgcgttgccgtaccgcgctgggtgcccgtgatggtatcgccgccaagaacctg
ctgggtgcgatcctcaacgaaggtggcctggcccgtgatgcgatcggtcgcatccaggtg
cgtgacagcttcagcctggtcgagctgccggaagacggcctcgagcgcctgctgaccaag
ctcaaggacacccgcgtggctggcaagcagctgaagctgcgtcgctaccgcgaagattga
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