Priestia aryabhattai: I5S86_08430
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Entry
I5S86_08430 CDS
T07135
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
parh
Priestia aryabhattai
Pathway
parh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5S86_08430 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parh03019
]
I5S86_08430 (rne)
03009 Ribosome biogenesis [BR:
parh03009
]
I5S86_08430 (rne)
Enzymes [BR:
parh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I5S86_08430 (rne)
Messenger RNA biogenesis [BR:
parh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I5S86_08430 (rne)
Ribosome biogenesis [BR:
parh03009
]
Prokaryotic type
rRNA processing factors
I5S86_08430 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
QPN46903
LinkDB
All DBs
Position
complement(1855014..1858226)
Genome browser
AA seq
1070 aa
AA seq
DB search
MKRMLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGKITRIEPSLEAAFVDF
GSERHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISL
AGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLTVPGDMGLIVRTAGLGRSSEEMQW
DLDYLLQLWTAIKEASLDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALT
FIRQVMPQYASKVKLYEDSVPLFNRFQIESQIETAFQRVVDLPSGGSIVIDPTEALVSID
INSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERV
REALEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCSGTGIIRDVESLSLAI
LRLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIIILPNDHLETPHF
EVQRLRDDNPEVLNNQSSYEIAATETEEAPQPTATRTLVRQEAAVKTAPARANAPVPSAV
EEQQPAAPAAPAPSVPEPSLFKGLVKSLVSLFAGKEEPAAAPVVAAEKPATERTQRNEER
RNGRQQSRNRNGRRDEERKPREERAERAPREERQPREERAPREERAPREERAPRQPREDR
RGNREERVRELREPLDAAPATREERQPREERAPREERAPREERAPREERAPREERAPREE
RAPREERAPREERAPREERAPREERQPRPPREERQPREAEQAAEKAAELADEQLPNEELQ
QDEQEGSDDERPRRRSRGQRRRSNRRERQRNANGELIEGSEEEGSDEQPQQHQATELGAE
LAAGLAVTAAVASSNISAGAEAQANQQAERASAEAATTDNSEVAQPAEQVEAVAKAEEIA
IAPVVEQPLSEPVAAVQASAEPVVEVAPEPVVEQAPAVEPVVVAEAPVEAPVEAPAIEAG
EAEKAQVAAEQAPAAELPSAVVETQPEVAAEPVATVVEAAPVVAEPAPVEAPAAVEAATV
MLPNGRAPNDPREVRRRKREAEAAAKAAQEAAAAGTPALETADEHKPHHG
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgcaactcaacccgaagagttgcgtgtagccctggtggac
ggccaacgtctctacgacctggacatcgagtccggcgcgcgtgagcagaaaaaggccaac
atctacaaaggcaagatcacccggatcgagcccagcctcgaagccgccttcgtcgacttc
ggctccgaacgtcacggcttcctgccgctgaaggaaatctcccgcgagtacttcaagaaa
gcccctgaaggccgcgtcaacatcaaggatgtcctgagcgaaggccaggaagtcatcgtc
caggtcgagaaggaagagcgcggcaacaaaggcgccgccctgaccaccttcatcagcctg
gcaggtcgctacctggtgctgatgcccaacaacccacgcgctggcggcatctcccgccgc
atcgaaggcgaagagcgcaacgaactgcgtgaagccctcaacggcctgaccgtgccaggc
gacatgggcctgatcgtgcgcaccgctggccttggccgcagcagcgaagaaatgcagtgg
gacctcgattacctgctgcagctgtggaccgccatcaaggaagcatccctggatcgcgct
gcacccttcctgatctaccaggaaagcaacgtcatcatccgcgccatccgcgactacctg
cgccaggacatcggcgaagtgctgatcgacagcatcgatgcccaggaagaagccctgacc
ttcatccgccaggtgatgccgcagtacgccagcaaggtcaagctgtacgaagacagcgtg
ccgctgttcaaccgcttccagatcgaaagccagatcgagaccgccttccagcgcgtcgtc
gacctgccatcgggcggctcgatcgtgatcgacccgaccgaggccctggtttccatcgac
atcaactcggcgcgcgccaccaagggcagcgacatcgaggaaaccgccctgcagaccaac
ctggaagcggccgaggaaatcgcccgccagctgcgcctgcgtgacatcggcggcctgatc
gtcatcgacttcatcgacatgacgccggcgaaaaaccagcgcgccgtcgaagaacgtgta
cgcgaagccctcgaggcagaccgcgcccgcgtgcaggtcggccgcatctcgcgcttcggc
ctgctggaaatgtcccgtcagcgcctgcgcccgtcgctgggcgaaagcagcggcatcgtc
tgcccgcgctgctccggcaccggcatcatccgtgatgtcgagtcgctgtccctggccatc
ctgcgcctgatcgaagaagaagccctgaaggaccgtactgccgaagtacgcgcccaggta
ccgattccggtggccgccttcctgctcaacgagaagcgcaactcgatcaccaagatcgaa
ctgcgcacccgtgcccgcatcatcattctgccgaacgaccacctggaaaccccgcacttc
gaagtccagcgcctgcgcgacgacaacccggaagtgctgaacaaccagtccagctacgaa
atcgccgccaccgaaaccgaagaagcgccgcagccgaccgccacgcgcaccctggtgcgc
caggaagcagcggtcaagaccgcaccggcccgcgccaacgctccggtaccgagcgctgtc
gaagaacagcagcctgccgcaccggcagccccggcacccagcgtaccggagccaagcctg
ttcaaaggcctggtgaagtcgctggtcagcctgttcgccggcaaggaagagcctgccgcc
gcaccggtggtcgccgccgagaagcctgccaccgagcgcactcagcgtaacgaggagcgt
cgcaacggccgccagcagagccgcaaccgcaacggccgccgtgacgaagagcgcaaacct
cgtgaagagcgcgccgagcgtgcgccgcgtgaagagcgccagccgcgtgaagagcgcgca
cctcgtgaagaacgtgcccctcgtgaagagcgcgcacctcgccagccacgcgaagaccgc
cgcggcaaccgcgaagagcgcgtccgcgaactgcgtgagcctctggatgcagcaccggcc
actcgtgaagagcgccagccacgtgaagagcgtgctccacgcgaagaacgtgcgcctcgc
gaagaacgtgcgcctcgcgaagaacgcgcacctcgcgaagaacgtgcgcctcgtgaagag
cgtgcacctcgcgaagaacgcgctccacgtgaagagcgtgcacctcgcgaagaacgcgca
ccgcgcgaagaacgtcagcctcgcccgccacgcgaagagcgccagccacgtgaagctgag
caggctgccgagaaggctgcagagctcgccgatgagcaactgccgaacgaggagctgcaa
caggacgagcaggaaggttccgatgacgagcgtccgcgccgccgctcccgcggccagcgt
cgccgcagcaaccgtcgtgagcgccagcgcaacgccaatggcgagctgatcgaaggcagc
gaggaagaaggcagcgacgagcaaccgcaacagcaccaggccaccgagctgggtgccgaa
ctggctgccggcctggccgtcaccgccgctgtcgccagcagcaacatcagtgccggcgcc
gaagcgcaagccaaccagcaggctgaacgcgccagtgccgaagccgcgaccaccgacaac
agcgaagtcgctcagccggccgagcaggtcgaagccgtcgccaaggccgaggaaatcgcc
attgcaccggtggtcgagcagccgctcagcgagccggtcgccgcggtccaagccagtgcc
gagcctgtggttgaagttgcgcctgagccggtagtcgaacaggcccctgcggtcgagccg
gtagtggttgccgaggcgcctgtagaggcacctgtcgaagcaccggccatcgaagcaggt
gaagcagagaaagcccaggtcgccgctgaacaagcgccggctgccgagctgccttctgct
gtcgtcgaaacccagccagaagtggctgccgagcctgtagcaaccgtagttgaagcagca
cctgtagtcgccgagcctgccccggtagaagcaccggcagcggtcgaagcggccaccgtc
atgctgcctaacggccgcgcccctaacgacccacgcgaagtgcgtcgtcgcaagcgtgag
gccgaagcggcagccaaggctgcgcaggaagcggccgctgctggcacgccagcgctggag
accgccgatgagcacaagcctcatcacggttga
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