Priestia aryabhattai: I5S86_23025
Help
Entry
I5S86_23025 CDS
T07135
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parh
Priestia aryabhattai
Pathway
parh03030
DNA replication
parh03430
Mismatch repair
parh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I5S86_23025 (dnaE)
03430 Mismatch repair
I5S86_23025 (dnaE)
03440 Homologous recombination
I5S86_23025 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parh03032
]
I5S86_23025 (dnaE)
03400 DNA repair and recombination proteins [BR:
parh03400
]
I5S86_23025 (dnaE)
Enzymes [BR:
parh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I5S86_23025 (dnaE)
DNA replication proteins [BR:
parh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I5S86_23025 (dnaE)
DNA repair and recombination proteins [BR:
parh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I5S86_23025 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QPN44379
LinkDB
All DBs
Position
complement(4969445..4972969)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSVPFVHLRVHSEFSLVDGLVRIKPLAKALAGMNMPAVAITDQSNMCALVKFYKAAMGAG
IKPICGADLWLAGADPEAPLSRICFLAMNPKGYRNLTELISRGWTDGQRNGLVILQREWI
APGSEGLIALSAGKEGDIGMALMAGRTTEAEALLHDWMGMFPERFYVEVQRTNRAGDEEY
VHAAVALADKVGAPLVATNDVRFIKQSDFDAHESRVCIGEGWTLDDPRRPRMYSDQQYLK
SADEMAELFSDLPDAIANTVEIAKRCNIQVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQLYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
ADAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKGDEDAREIWEMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKNNLPDVNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVVLIEEVRSMKLRLDAPDVNASEFKFTVNDDGRIIYGLGAI
KGVGEGPVEAIVEARAEGGPFKDLFDFCERVDLKRVNKRTLDALIRSGALDRLGPHFHDE
IKAYHASIDINRATLLSALEEAIKAAEQTARTADSGHVDLFGGLFVEEDSDVYANHRKVR
ELTLKERLKGEKDTLGVYLTGHPIDEYEGEIRRFARQRIIDLKPSRETQTIAGMIIAMRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMGAQALLQNDAMVVVEGEVSNDDFSGGLRL
RVKQVMTMEDARTKLAESLRLKITHDALKGDRLNWLGELITRHRGGCPITLEYTGSDAKA
MLQFGDQWSIDPADGLIQALRDQFGRENVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccttcgttcacctgcgcgtccactccgaattttcgctggtcgacggcctg
gtgcggatcaagccgctggccaaggcgctggccgggatgaacatgcccgcggtggcgatc
accgaccagagcaacatgtgcgcgttggtgaagttctacaaggccgccatgggcgcgggc
atcaagccgatctgcggtgctgacctgtggctggccggtgccgaccctgaagcgccgctg
tcgcgcatctgcttcctggctatgaaccccaagggttaccgcaaccttaccgagctgatc
tcccgaggctggactgacggccagcgcaatggcctggtcattctgcagcgtgagtggatc
gccccgggcagcgaaggtctgattgccctgtccgccggcaaagagggcgatatcggcatg
gccctgatggccggccgtaccactgaggccgaggcgctgctgcacgactggatgggcatg
ttccccgaacgtttttacgtcgaggtgcagcgtaccaatcgtgccggtgatgaagaatac
gtgcacgctgccgtggcgctggccgacaaggtcggtgcgccgctggtggccaccaatgat
gtgcgttttatcaagcagtcggacttcgacgcccacgaaagccgcgtgtgcatcggtgaa
ggctggaccctggacgacccgcgtcgcccgcgcatgtacagcgaccagcagtaccttaaa
agcgcggatgaaatggccgagctgttcagcgacctgcccgacgcgattgccaacaccgtc
gaaatcgccaaacgctgcaacatccaggtccagctgggcaagtacttcctgcccgacttc
ccgacgcccaatggcatgggcatcgacgactacttgcgccatgtttcgcacgaaggcctg
gaggagcgcctggcggtgctctggcccaaggagaccacgcccaattacgaagagaagcgc
cagctctacctggaccgcctgaagttcgaactggacatcatcatccagatgggtttcccg
ggttacttcctgatcgtgatggacttcatcaagtgggccaagaacaacggcgtgccggta
ggcccgggccgtggttcgggtgccggctcgctggtggcctacgtactgaagatcaccgac
ctcgatcctctggcctacgacctgctgttcgaacgtttcctcaaccccgaacgtgtttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtg
gccgacgcctacgggcgcaatgcggtcagccagatcatcaccttcggtaccatggccgcc
aaggcggtggtacgcgacgtggcgcgggtgcagggcaagtcctatggcctggccgaccgt
ttgtcgaagatgatcccgttcgaagtgggcatgaccctggagaaggcgtatgagcaggaa
gaaatcctgcgcgacttcctcaagggcgacgaagacgcccgcgaaatctgggagatggcg
ctcaagctcgaaggtgtcacccggggtaccggcaagcacgccggtggtgtggtaatcgcc
ccgaccaagctcaccgatttctcgccgatcgcctgtgacgaagagggcggcggcctggtg
acccagttcgacaaggacgatgtcgaggccgccggtctggtcaagttcgacttccttggc
ctgcgtaccctgaccatcatcaagtgggcgatggagacgatcaaccgcgagcaggccaag
aacaacctgcccgacgtcaacatcgacttcatcccgctggacgatcgcaagacctacgag
ttgctgcagaaggccgaaaccacggcggtattccagctcgaatcgcgcggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagaccttatcgcactggtggcattgttc
cgcccaggccccctgcaatcgggcatggtggacgacttcatcaaccgcaagcacggccgc
gccgaactcgcctacccgcactcggattaccagtacgaaggcctcaagcccgttcttgcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcg
gggtacaccctcggcggcgccgacatgctgcgccgcgccatgggtaagaaaaagcctgag
gaaatggccaagcagcgcggtggcttcatcgaaggttgcgtcgccaacaacatcgatgca
gacctcgccggcaacatcttcgacctggtggaaaagtttgccggttacggcttcaacaag
tcccactcggcggcctacggtctggtgtcttaccagaccgcctggctcaagactcattat
ccggcgccgttcatggccgcggtcctgtcggcggacatgcacaacaccgacaaggtggtg
gtgctgatcgaagaagtgcgcagcatgaagctgcgcctcgatgcgccggacgtgaatgcc
tcggagttcaagttcacggtcaatgacgacggccgcatcatctatggcctgggcgccatc
aaaggcgtgggtgaaggcccggtggaggccattgtcgaggcacgcgccgagggtggccca
ttcaaggacctgttcgacttctgtgagcgggtcgacctcaagcgggtgaacaaacgcaca
ctcgatgcgctgatccgcagtggcgcactggaccgcctgggcccgcactttcatgatgag
atcaaggcctaccacgccagtatcgacatcaatcgcgcgaccttgctgtcggccctcgaa
gaagcgatcaaggctgctgagcagacggcacgcaccgccgatagcggtcacgtcgacctg
ttcggcgggctgttcgtcgaggaggactccgatgtttacgccaaccaccgcaaggtgcgt
gaactgacgctcaaggagcgcctgaagggcgagaaggatacccttggcgtatacctcacc
ggccacccgatcgatgaatatgaaggggagatccgccgtttcgcccgccagcgcatcatc
gatctgaaaccctcccgcgagacgcagactatcgccggcatgatcattgcgatgcgggtg
atgaagaacaagaagggcgacaagatgggctttgtcaccctcgatgaccgctccgggcgt
atcgaagcgtcgctgttcgccgatgccttcatgggcgcccaggcgttgttgcagaacgat
gccatggtcgtggttgagggtgaggtcagcaatgacgacttctccggtggcctgcgcctg
cgcgtcaagcaggtgatgaccatggaagacgcccgtaccaagctggccgagagcctgcgc
ctgaagatcacccacgatgccctcaagggcgaccgcctgaactggctgggcgagctgatc
acccgccatcgcggtggttgcccgatcaccctcgaatacaccggcagcgacgccaaggcg
atgctgcagttcggcgaccaatggtcgatcgacccggccgatggcttgattcaggcgctg
cgtgaccagttcgggcgtgagaacgtcttcctgcaatatcgttga
DBGET
integrated database retrieval system
