Pectobacterium aroidearum: I2D83_00575
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Entry
I2D83_00575 CDS
T07244
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pari03021
]
I2D83_00575 (rpoH)
Transcription machinery [BR:
pari03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I2D83_00575 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QPI43181
LinkDB
All DBs
Position
140867..141724
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLDAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWDTHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggatgcggctaagcacctgattctgtcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaggcggtacgtcgctttaaccctgaagtgggcgtgcgt
ctggtttctttcgccgtgcactggattaaagcagaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtcgcgaccaccaaagcacagcgtaaactgttctttaacctgcgg
aagacgaaaacgcgcctcggctggtttaaccaggatgaagtcgaactggtggcacgtgaa
ctgggcgtgaccagcaaagacgtgcgcgagatggaatcccgtatggcggcgcaggacatg
acgttcgatccaacgccggaagaagattcgcacgacggcaaagcgatgtcgccgatgctt
tacctacaggataaatcgtctgactttgccgatggcattgaagaagataactgggacacg
catgcggcggataagctcacttacgcgctggaagggctggatgaacgtagccagcatatt
atccgagcccgttggctggatgatgacaacaaatccaccttgcaggaattggccgatcaa
tacggcgtttccgcagagcgtgtgcgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcgtaa
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