Pectobacterium aroidearum: I2D83_01420
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Entry
I2D83_01420 CDS
T07244
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00300
Lysine biosynthesis
pari00470
D-Amino acid metabolism
pari01100
Metabolic pathways
pari01110
Biosynthesis of secondary metabolites
pari01120
Microbial metabolism in diverse environments
pari01230
Biosynthesis of amino acids
Module
pari_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I2D83_01420 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I2D83_01420 (dapF)
Enzymes [BR:
pari01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I2D83_01420 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QPI43333
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Position
325760..326584
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AA seq
274 aa
AA seq
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MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLSVTDDELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRADEHTVLCGVVSMGNPHCVIQVEDVDTAKVETLGPLLE
SHERFPERANIGFMQVVDSHTVRLRVYERGAGETQACGSGACAAVAVGIQQGLLSANVRV
SLPGGDLDIQWDGPGHPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgctaagatgcacggattaggcaacgatttcatggttgttgatgccgttacg
caaaacgtttatttttcacccgaattgattcgccgtttggcggatcggcactgtggtgtg
gggtttgaccaactgctggtcgttgagccgccctacgatcctgaactggattttcattat
cgtatttttaacgcggatggcagtgaagtggcacagtgcggtaacggtgcgcgctgcttt
gctcgttttgttcgcttgaaagggctgaccaacaagcgtgatatcgccgtcagtacgcag
acgggccggatggtgctgtctgtgacggatgatgaactggtgcgtgtcaacatgggcgaa
ccgaatttcgagccgcaacaggtgccttttcgcgcggtcaaagcagagaaaacctacatc
atgcgtgccgacgaacacacggtactttgtggcgtggtgtcgatgggcaacccgcactgc
gtgattcaggttgaggatgtggacacggcgaaagtggaaacgctggggccgctgttggaa
agccacgagcgttttcccgagcgagccaacattggttttatgcaggttgtcgatagccac
actgtccgcctgcgggtgtacgagcgcggtgcgggagaaacgcaggcgtgtggtagcggc
gcgtgtgccgccgtggcggtagggatccagcaggggctattgtccgcgaacgttcgcgtg
tctctgccgggcggggatttggatatccagtgggatgggccgggacatccgttattcatg
accgggcctgcaacgcatgtctacgatggatttattcatttatga
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