Pectobacterium aroidearum: I2D83_01850
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Entry
I2D83_01850 CDS
T07244
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00300
Lysine biosynthesis
pari00470
D-Amino acid metabolism
pari01100
Metabolic pathways
pari01110
Biosynthesis of secondary metabolites
pari01120
Microbial metabolism in diverse environments
pari01230
Biosynthesis of amino acids
Module
pari_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I2D83_01850
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I2D83_01850
Enzymes [BR:
pari01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
I2D83_01850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QPI43413
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All DBs
Position
432777..434180
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AA seq
467 aa
AA seq
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MSNLFSFAAVSSPAVAQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLMTLVHHRALIVLDSPEEFDEVLALADVLRVTEPVRVLLRYRP
SFAQASRFGMLADEAARCLETLSIRQDALRLEGFHFHLGGYEPDTRVAALSEVLPLLEQA
RAKGLQPAIIDIGGGLPIQYLPASRYQDYLAKQNGVDYRHGQVPTSFYPYGGECSAADYL
EAFLSASIGDTRVAEVLKQHGLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTPPTPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
PGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttcccccgctgtcgcgcaggcccactgg
cctgagagactgacgccttatctggatagtgagattgagcagtttcttttcaactcgccg
caaaggttgtcatggctggttgagcagtatgggtcgccgctgaatattgtctggccgcac
acggtggccaacaatatcgcggcattgcgaacggtgttgcagcgccacgatgtggactgc
cgcctgtactacggcgcgaaggtgaacaaatcaccggggctggtgcaggcggccgttaac
gcgggcgtcggcgtggatgtttccagtttacaggagctgaaagatgccctgcgggctggc
tgtgacggcgcacgactgtgcgccactggtccagcgaaaacgcgcgagttcctgatgacg
ttggttcatcaccgtgccctcatcgtgttggattcgccggaagagttcgacgaggtgctc
gcgctggcggatgtgctgcgcgtgacggagccagtacgcgttttgctgcgctatcgcccg
tcgttcgcacaggccagccggtttggcatgctggccgatgaggccgcacgctgtctggag
acactgagcatcagacaggatgcgcttcggctggaaggctttcacttccatctgggcggt
tatgagcccgatacccgtgtggccgcattgtctgaggtgctgccattgctagagcaggcg
cgcgcaaagggattgcagcccgccattattgatatcggcggtggattaccgattcaatat
cttccggcctcacgctatcaggattatttagcgaagcagaatggggtggattatcgccac
ggtcaggtgccgacctcgttttacccatatggcggtgagtgttcagcagctgattatctt
gaggcatttctgtcagcctcaatcggggatacccgtgtggcagaggtgctcaaacaacac
ggcttgattctggcgattgaaccggggcgcagcctggctgaccaaagtgccattacggta
tttcgcgtgacgcgaacgcgtcgccagccagacggcaaccacgttgtgtttgtggaaggc
agtagcttcagcgcctgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacccctccgacgccgggcaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
ccaggtgatttactgatttacgcgaatacggcgggataccagatggacctgctggagaac
gcgtttcatcgacatccgctgcctgcgcgcttgtgtgcgttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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