KEGG   Pectobacterium aroidearum: I2D83_05495
Entry
I2D83_05495       CDS       T07244                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pari  Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:pari00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pari02044]
    I2D83_05495 (tssC)
Secretion system [BR:pari02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I2D83_05495 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QPI44062
LinkDB
Position
1226258..1227736
AA seq 492 aa
MSIVEEQAQAGAASASGSLLDDIMAQARITPVDEGYSVAKQGIAALVANILDSGNAAEPV
NKALVDSMIVELDKKLSKQIDVILHAKELQELESSWRSLKLLVDRTDFRENIKLLVLHAT
KEELLEDFEFAPEISQSGFYKHVYSSGYGQFGGQPIGGVIGDYAMTQSSPDIKLMQYVSA
VGAMAHAPFISSVAPTFFGVDSFTDLPSIKDLKSVFEGPAYTKWRSLRESEDGRYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISTDHEHYLWGNTAYLMGTALTDSFAKYRWCPNIIG
PQSGGAITDLPVHVYEAMGQLQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFS
ANSVQKPKVFPNTKEGKEAETNYKLGTQLPYMFIINRLAHYIKVLQREQIGSWKERQDLE
RELNTWIKQYIADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMSVRPHFKYMGAN
FELSLVGRLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcaatagttgaagaacaggcccaggcaggggctgccagcgcctccggatcgctgctt
gatgacatcatggctcaagcgcgtatcaccccggtcgatgaaggctacagcgttgctaaa
caggggattgccgcactggtcgctaacattcttgatagcggtaatgcagcagaacccgtg
aataaagcgctggtcgatagcatgattgtcgaactggacaaaaagctcagtaagcagatc
gacgttattctgcatgctaaagaacttcaggagctggaatcttcctggcgttcgctgaaa
ctgcttgtcgatcgcactgatttccgtgaaaacatcaaactgttggtgttacatgcgacg
aaagaagagctgttagaggattttgagttcgcgcctgaaatctcacagtctggcttctat
aaacatgtgtactccagcggttacggccagttcggcggccagcctattggtggcgtgatc
ggtgactatgcgatgacgcaaagctcaccagacatcaaactgatgcagtacgtcagcgcc
gttggcgcgatggcgcacgcaccattcatctcttccgttgcgccgaccttctttggcgta
gacagcttcactgatttaccgtccatcaaagatctgaaatccgttttcgaaggccctgcc
tacacgaaatggcgttcactgcgtgaatctgaagacggtcgctatctgggcctgacggca
ccgcgcttcctagctcgcttgccttacgacccggtagaaaacccgattaagggctttaac
tacaaagaagatatcagcaccgatcacgaacactacctgtggggcaacaccgcctacctg
atgggaacggcgctgacggacagcttcgcgaaataccgctggtgtccgaacatcattggc
ccgcagagcggcggtgcgattaccgatctgccagtgcatgtttatgaagcaatgggtcaa
cttcaggccaagatcccgactgaagtcctgatcaccgatcgtcgcgaatatgaaatggcc
gaagagggctttatcacactgacgatgcgtaaagacagcgacaacgcagctttcttctcg
gctaactcggtgcagaagccgaaggtgttcccgaacaccaaagaaggcaaagaagcggaa
accaactacaagctgggtacgcagctgccgtacatgttcatcatcaaccgtctggcgcac
tacatcaaagtgctacagcgtgaacagattggctcatggaaagagcgtcaggatctggaa
cgtgagctgaatacctggattaaacagtacatcgccgatcaggaaaacccgccggcagat
gtccgtagccgtcgtcctctgcgtgccgcacaaatcaaagtgctggatgtggaaggagaa
ccaggttggtatcaggtcaccatgtctgtgcgcccgcacttcaagtacatgggggcaaac
tttgaactgtcgctggtagggcgtttggataaggaataa

DBGET integrated database retrieval system