KEGG   Pectobacterium aroidearum: I2D83_05555
Entry
I2D83_05555       CDS       T07244                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pari  Pectobacterium aroidearum
Pathway
pari03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pari00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I2D83_05555 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pari02044]
    I2D83_05555 (tssM)
Secretion system [BR:pari02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I2D83_05555 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF802
Other DBs
NCBI-ProteinID: QPI44074
LinkDB
Position
1240953..1244450
AA seq 1165 aa
MFKTIITFLRKQLPKLKPSWLLLGVLLWIVVLVLAWWLGPRLVVGESRPLQGIWGRVVFT
LVWLWLAFSYSAWMVWRRVQQMRAERHEQQVIEQDPLQVYVDSQQTFLDRWLEAFQTQLG
KRALYAMPWYLTIGLAGSGKSSLIHRANPANKMNPKLDAELRDVAAGQQVSSWVGESAVI
WDPSGQLLAQPELEGDSLGQRYARLWQHLLQWLSENRRRQPLNGLVLTLDISWLAQAGVA
DRKAYAQVMRARLQEISVNINTRLPVYIALTRLDMLSGFDKVYRQLNRDARQAVLGVTFT
PQASNGKGWLEELERFWDEWVTHLNDNLPDMLLTQSDRSVRNSLFSFVRQLAGVKDYVME
VLTETLATGEDRAFLIRGVYVSSVYQQGVPFDAFAQSASRRYQLPEPINPALRGESNTFF
VQRLFPDVIFPEASLAGENRLHSLYRRRRLSIGVGCMLLASLVLIGSWHHFYRVNEEAGR
NVLTKAQAFIGTNELEGQPGYGYQQLPRLNLIRDATLSFGNYHERTPMLADLGLYQGGKI
GPYVEGTYLQMLNQRFLPAVMQGLLEDLNQAPANSEQKLTILRVMRMLDDASGRNKSLVE
QFMAQRWQKAFPGQGNVQEQLMQHLDYALEHTDWHKAREQKDAVAISTFAPFNQPITLAQ
QELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDPVFSLRNDKAGSVPRLLTYPG
FSDYYLKQDKALLELTALDAWVLGQRERAQFSEADRREILRQVNDRYITDYINQWQKVLA
NIDVQTLDTPEQALDILTDITGNDQPFQRVLTTVSDNTRIRKLADDDNDTAQNINTRIGR
PFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNATDPGQAALKAVQARQGNKFAD
PVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLDKVVTPFNEKLADRYP
FDPSSNKDVPLSEMEMFFMAGGTLDSFYQTNLKAMMESGMLEEGMASPLQAELVKQLERA
TRIRQTLFNAQGSLEVHFVLEPLELTANKRRSVLNLDGQLLEYSHGRRQKTPLVWPNSMR
DGAESKLTLVPDDRERSPRSLSFSGPWAMFRLINSDQLTQVNENTFDVRFSLENGAMTYR
VYTDASHNPFAGGLFSQFTLPDSLY
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgtttaaaacaatcataacctttctacgcaagcagttgcctaaactgaaaccctcctgg
ctgcttttgggcgtgctactgtggatcgtcgtgctggttctggcctggtggctggggccg
cgtttggtggtgggcgaatcacgcccgttacagggaatctggggtcgcgtggtgttcacg
ctggtctggctgtggctggcgttctcctatagtgcctggatggtctggcgtcgtgtgcag
cagatgcgtgcggagcgtcatgaacaacaggtaattgagcaggatcccttgcaggtgtat
gtcgatagccagcagacgtttctcgatcgctggctggaggcgtttcagacccaactgggt
aaacgcgcactgtatgcgatgccctggtatctgacgattggtctggctggcagcgggaaa
agcagcctgatccatcgtgccaatccggcaaacaaaatgaacccgaagctggatgcggag
ctgcgagacgtggcggcaggccagcaggtgagcagttgggtcggtgagtccgccgttatc
tgggatcccagcggacagctactcgcacagcctgaactggaaggcgattcactcggacag
cgttatgctcgactgtggcagcacctgctccagtggctgagtgaaaaccgccgccgtcag
ccgcttaatggtctggtgctcacgctggatatttcctggctggcacaggctggcgtcgcg
gatcgcaaagcttatgcgcaggtcatgcgcgcgcgtttgcaggaaatttccgtcaacatc
aatacgcgcttaccggtgtatatcgcgctgacccgtctggatatgctgagcggcttcgat
aaggtctatcgccagttaaaccgcgacgcgcgtcaggcagtattgggggtgacctttacc
ccgcaggcgagcaatggcaaaggttggctagaagagctggagcgtttctgggatgagtgg
gtcacgcacctgaatgacaacctgccagacatgctgctgacgcagtccgacagaagcgtg
cgcaattcgctgttctcgttcgtccgccaactcgctggcgtgaaagattatgtgatggaa
gtgctgacggaaacgttagcgacgggcgaggatcgcgcgtttctgatccgcggtgtttac
gtgagttctgtctatcagcaaggggtaccgttcgatgcctttgcgcagtcggcttcccga
cgctatcaactgcctgaaccgattaatcccgcgctgcgcggggaatccaatacgttcttt
gtgcagcgcctttttcctgacgtcatcttccctgaagccagtctggcgggtgaaaaccgg
ctgcatagcctctatcgtcggcgtcgactgagcatcggcgtgggctgcatgctgcttgcc
agtctggtgctgattggcagctggcaccatttctatcgggtcaatgaagaggccggacgt
aacgtactgacgaaagcgcaggcgtttatcggcaccaatgaactggaagggcagccgggc
tacggttatcagcagttgccgcggttgaatttgattcgcgatgcgaccttatcttttggt
aattaccacgaacgtacgccgatgctggccgatcttggcctgtatcagggcggcaagatt
gggccttatgttgaaggcacttacctgcaaatgctgaaccagcgctttcttccggcggtg
atgcaagggttgctggaggatttgaatcaggcacctgccaatagtgagcaaaagctgacg
attctgcgcgtgatgcggatgttggatgatgcgtcagggcgtaataaatcgctggtcgaa
cagtttatggcgcagcgttggcagaaggcatttcccggtcagggcaatgtgcaggaacaa
ctgatgcagcatctggattatgcccttgagcacacggattggcacaaggcgcgtgagcag
aaagatgcggtagccatcagcacgtttgctccctttaatcagccgattacgcttgcccag
caggaactgagcaagctgccgatgtatcagcgcgtttatcagagcctggtcatgaaggcg
acacaggtattgccaccagatttagcgatccgtgatgaggtcgggccgacctttgatccg
gtgttttccctgcgtaatgacaaagcgggaagcgtgccgcggctgctaacgtaccccggc
tttagtgattattacctcaagcaggacaaagccctgttagagctgacggcgctggatgcc
tgggtactgggacagcgtgagcgtgcgcagttcagcgaggccgatcggcgtgaaattctg
cgtcaggtgaacgatcgctacattacggattacatcaaccagtggcagaaagtgctggcg
aacattgatgtgcagacgctcgatacgccggagcaggcgctcgatattctcacggatatt
accggcaacgatcagcctttccagcgcgtgctgacgacggttagtgataatacccgcatt
cgtaagctggccgatgatgacaacgacacggcgcagaacatcaatacgcggattggtcgt
ccgtttatgaccatcaacgcggcgctgagcggacgtggtgagcaagggccgctggtgcaa
gaggtcaatcagaagctgaccgatctctatcactatctcgatcagatcgttaacgcgacc
gatcctgggcaggcggcgttgaaagcggtgcaggcgcggcagggaaataaatttgccgat
ccggtattcgctttacagcaatacgcccgcagccttcccgcaccgctggatcgctgggtc
ggacagctcgctggagagagcgcgagtttggtgaccggactggcgatgtcgtcactgaat
caggaatggctggataaagtcgtgacgccattcaatgagaagctggcggatcgttatccc
ttcgacccgtcatcgaacaaggatgtgccgctatcggaaatggaaatgttcttcatggct
ggcgggacgctggacagcttctatcaaaccaacctcaaggcgatgatggaaagcggcatg
ctggaagaaggcatggcgtcgccgttgcaggctgaactggtgaaacagcttgaacgcgcc
actcgcatccgccagaccctgtttaatgcgcagggcagtctggaagtgcatttcgtgctg
gagccgctggaactgacggcgaacaagcgccgcagcgtactcaatttggatggacaactg
ctggaatacagccacggtcgtcgccagaaaacgccgctggtgtggccaaacagtatgcgt
gacggggctgagagcaagctgacactggtgccggacgatcgtgagcgttcaccgcgcagc
ctgagctttagcgggccgtgggcgatgttccggttaatcaatagcgatcagctgactcag
gtgaatgagaacacctttgacgtacgtttctcgctggagaacggtgcgatgacgtatcgc
gtgtataccgatgccagccataacccgtttgccggtggtctgttcagccagttcacgctg
cctgactctctttattaa

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