Pectobacterium aroidearum: I2D83_06615
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Entry
I2D83_06615 CDS
T07244
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pari03009
]
I2D83_06615 (der)
Ribosome biogenesis [BR:
pari03009
]
Prokaryotic type
GTPases
I2D83_06615 (der)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Ras
AAA_22
Roc
AAA_24
ABC_tran
Nuc_deoxyri_tr2
SRPRB
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
QPI44248
LinkDB
All DBs
Position
1480684..1482171
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AA seq
495 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGHEFIIVDTGGI
DGTEDGVETRMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSREKTTVLVANKT
DGLDPDMVTADFYSLGMGEVYPIAASHGRGVTSLLETVLLPFVQDEIEEPVELSEEEENA
AYWAALEADEQASEEEAEDDFNPEDLPIKLAIVGRPNVGKSTLTNRILGEERVVVFDMPG
TTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDAR
EGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVREQVKETLDLRLGFIDFARIHFISA
LHGSGVGNLFESVTEAYACATRRVSTAMLTRIMQMASDDHQPPLVRGRRVKLKYAHAGGY
NPPIVVIHGNQVKDLPDSYKRYLMNYYRRSLDVMGTPIRIQFKEGENPFADKRNTLTPNQ
LRKRKRLMSHIKKGK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtggggaaatccacgctatttaac
cgcttaacgcgcactcgtgatgcattggtggcggatttccctgggctgactcgtgaccgc
aagtatggtcgtgcagaagtggaagggcatgaatttattatcgtcgataccggtgggatc
gacggtacagaagacggtgtggaaacgcgtatggccggtcaatcgctggtggcgattgaa
gaagcggatatcgtgctgttcatggtcgatgcccgcgcgggattgatgcctgcggatgaa
ggcattgccaagcatttgcgcagccgcgaaaaaacgacggtgctggttgcgaacaaaact
gatggtcttgacccggatatggtcacggcagatttctactcgctcggaatgggggaagtg
tacccgattgccgcgtctcacggtcgcggcgtcacgtcgttgctggaaacagttttgctg
ccgtttgtacaagatgaaatagaagagcctgttgagttaagcgaagaagaagagaacgca
gcttactgggcagcgttagaagcggacgagcaggctagcgaagaagaagcagaagacgat
ttcaatcctgaagatttgccaatcaaactggcgattgtcgggcgtccgaatgtgggtaag
tccacgctcactaaccgtattctgggcgaagagcgcgtggtggtgttcgacatgccgggc
acgacgcgtgacagtatctacatcccaatggtgcgtgacgaacgcgaatacgttctgatt
gataccgctggggtacgtaagcgcggcaaagtgacggaaacggtagaaaaattctccgtt
atcaaaacgttgcaggcgattgaagatgccaacgtggtgctgctggttatcgacgcgcgt
gaaggtatttccgatcaggatctctcgctgctgggcttcatcctcaatagtgggcgctca
ctggtgatcgtggtgaacaaatgggatggcctgtcgcaggaagtgcgtgagcaggtgaaa
gagacgctggatctgcgccttggctttatcgactttgcccgtattcacttcatttctgcg
ttacatggcagcggtgtgggtaacctgtttgagtccgtaaccgaagcctatgcgtgcgcc
actcgtcgcgtgagtacggcgatgttgacccgtatcatgcaaatggcatcagacgatcac
cagccgccactggtgcgcggtcgtcgcgtgaagctgaaatatgcgcacgccggtggctat
aacccaccgattgtggtgatccacgggaatcaggtgaaagacctgccggattcttacaag
cgctatctgatgaactactatcgtcgttcgctggacgtaatgggcacgccgattcgtatc
cagtttaaagaaggggaaaacccttttgcagacaagcgcaacacgctgacgccaaaccag
ctacgcaagcgtaagcgtttgatgtcacacattaaaaaaggtaagtaa
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