Pectobacterium aroidearum: I2D83_06640
Help
Entry
I2D83_06640 CDS
T07244
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I2D83_06640 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_06640 (xseA)
Enzymes [BR:
pari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I2D83_06640 (xseA)
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I2D83_06640 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6594
TPD52
Motif
Other DBs
NCBI-ProteinID:
QPI44253
LinkDB
All DBs
Position
complement(1485116..1486504)
Genome browser
AA seq
462 aa
AA seq
DB search
MSQFPSSAIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQK
LAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAD
APLQIVRAIELANQREECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DITIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNREFTRLH
HRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTLRRSERLQQRLMQQQPQTRIHRA
QQRLQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNV
TQITPGETLKTRLQDGWVESQVTTLVPNPSSVKKRRKPSSQS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttccctcctctgcaatttttaccgttagccgactgaatcagacggttaga
caactgttggaaatggaaatgggccagatttggctctccggtgaaatatccaacctctct
cagccctcatccggccattggtatttcacgctgaaagatgaacgtgcgcaggtgcgctgc
gcgatgttccgtaccagcaaccgcagggtgacattccgtccacaaaacggccaacaggtg
ctgattcgggccaccattactctgtatgaaccccgcggcgactatcagctgttggcggaa
agtatgcagcctgccggtgacggtctgttgcagcaacagtttgaacagctcaagcagaaa
ctcgccgccgaagggctgtttgaccagcaatttaagcaggtactcccctctcccgccaaa
caggtcggtgtgattacgtcagccagcggtgccgccctgcacgatatcttgcaggtattg
cagcgccgtgacccgtcgctgccagtgatcgtgtatcccacgtcggtgcaaggcgcagac
gcaccgctacagattgttcgcgctattgagctggctaaccagagagaagagtgtgacgtg
ttaatcgtcgggcgcggcggcggttcgctggaagatctgtggagctttaatgacgaacgg
gtcgcccgcgctatcttcgccagccgcattcctatcgtcagcgccgtcggccatgagacc
gatatcactatcgctgatttcgtcggtgacctgcgagcacccacaccgtccgctgctgct
gagttagtgagtcgtaaccaacttgaactgttgcgccagatacagtcccagcgccagcgg
ctggaaatggcgatggattattaccttgcccagcgcaatcgggaatttactcgtctacac
caccgcttgcagcaacaacatccgcaactgcggctggcacgtcagcaggcccaactggtt
aaactgcgccaacggctggatgacgccatgcagcagcagcttcggcaaaccttacgccga
agtgaacgcttacaacagcgcctaatgcaacagcagccgcagacccgcatccatcgtgcg
caacagcgtttacagcagttgagctatcagatgcagagtgcagtggaacgccagttaaat
cagaacaagcagaagctgggtatcgcctgttcacggctggaaggcgttagcccgctggcg
acgctggcgcgcggctataacgtcaccaccgcccccgacggtaaggtactgaaaaacgtc
acgcaaattacccccggtgaaacgctgaaaacccgtttgcaggacggttgggtagaaagt
caggtcacgacgctggtgccgaacccaagttctgtgaaaaagcggcgaaaaccctcatct
cagtcataa
DBGET
integrated database retrieval system
