Pectobacterium aroidearum: I2D83_09225
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Entry
I2D83_09225 CDS
T07244
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pari03009
]
I2D83_09225 (rimO)
Enzymes [BR:
pari01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I2D83_09225 (rimO)
Ribosome biogenesis [BR:
pari03009
]
Prokaryotic type
ribosomal protein modification factors
I2D83_09225 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QPI44725
LinkDB
All DBs
Position
complement(2045396..2046724)
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AA seq
442 aa
AA seq
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MSNIAPPQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPK
PTHNPFTSLVPEQGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVDAGVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVY
PYPHVDDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLT
LRSTFIVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANALPDQVPEEVKEER
FHRFMQLQQAISAQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVK
VGDIVKVKVEHADEYDLWGSRV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatcgcccccccacaaccacgtatcggctttgtttccctcggctgcccgaaa
aacctcgtcgactccgagaggattctgaccgaactgcgtactgaaggttatcaggtcgtc
ccccgctatgacgacgctgaactggtgatcgtcaatacctgtggttttattgacagcgcc
gtacaagagtcgctggaagccatcggcgaagcgctgaatgagaacggtaaagttatcgta
acaggctgtctgggtgccaaagaaaatcaaatacgcgaagtgcatccaaaagttctggaa
attaccggtccgcacagctacgagcaggtgctgtcgcacgtgcatcaatatgttcctaaa
ccgacgcacaacccgtttaccagtttagtccctgagcagggcgtaaaactcacgccgcgc
cattacgcgtatctgaaaatttcagaaggctgtgaccaccgctgcacattctgcatcatc
ccatctatgcgtggcgatttagatagccgcccaatcggttcggtgctggatgaagcgaag
cgtctggttgatgccggcgtaaaagagctgctggtgatttctcaggacacctcggcgtac
ggcgcagatgtgaagcagcgtaccggtttttggaacgggcagccggtcaaaaccagtatg
gtcagcctgtgtgagcaactggcgtcgctgggcgtgtgggtgcgcctgcattatgtctac
ccttacccacacgtggacgatgtgatcccattaatggcggaaggcaaaatcctgccttat
ctggatatcccactccagcacgccagcccgaaaattctcaagctgatgaagcgccctggc
gcagtcgaaagaacgctggaacgtattaaacgctggcgcgaaatctgcccggacttaaca
ctgcgttctacctttattgtcggtttccccggtgagacggaagaagatttccagatgctg
ctcgacttcctgaaagaagccaaactcgaccgcgtgggctgctttaaattcagcccggtc
gaaggtgctgcggcaaatgcattgccggatcaggtgccggaagaggtcaaagaagaacgt
ttccaccgtttcatgcagcttcaacaggcgatctccgcccagcgtttgcaggataaaatt
ggccgtgaagtgctggtactgattgatgaaatcgacgaagaaggcgcgattggccgcagc
atggccgatgcacctgagatcgacggcgcagtttacctgaacggtgaaactggcgtgaaa
gtcggtgatatcgttaaggtcaaagttgaacacgctgacgaatacgatctgtggggtagc
cgagtataa
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