Pectobacterium aroidearum: I2D83_09695
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Entry
I2D83_09695 CDS
T07244
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I2D83_09695 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pari02000
]
I2D83_09695 (msbA)
Enzymes [BR:
pari01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
I2D83_09695 (msbA)
Transporters [BR:
pari02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
I2D83_09695 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
AAA_16
APS_kinase
DUF87
AAA_22
AAA_29
AAA_25
RsgA_GTPase
SLFN-g3_helicase
AAA_30
AAA_18
MMR_HSR1
ABC_membrane_2
AAA_15
nSTAND3
NB-ARC
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QPI45230
LinkDB
All DBs
Position
2158820..2160568
Genome browser
AA seq
582 aa
AA seq
DB search
MLNDKDLSTWQTFRRLWPMISPFKAGLAVAAIALIVNAAGDTLMLSLLKPLLDEGFGKAE
RSVLIWMPLVVIGLMLVRGLSGFVSSYCVAWVSGKVVMNMRRRLFSHIMGMPVAFFDQQS
TGTLLSRITYDSEQVAASSSGALITVIREGASIIGLFILMFYYSWQLSIILIVIAPIVSI
AMRVVSKRFRSISKNMQNTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFDQVSNRMRQQ
GMKMVSASSISDPVIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQSGMAACQTLFAILDMEQERDTGKREIERAQGELEFRQVSFAYPGRENLALK
NINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVA
LVSQNVHLFNDTIANNIAYARNEHYSREEIERAAKMAYAMDFINKMEHGLDTIIGENGVM
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLS
TIEKADEILVVEDGRIIERGNHVALLAENGAYAQLHRMQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgataaagatctctccacctggcagacctttcgacgcctatggccgatgatc
tctccttttaaagcagggttggcagttgctgcaatcgcactcattgttaacgctgctggc
gatacactaatgctttctctacttaaaccgttattggatgaaggcttcggcaaagccgaa
cgctccgtattgatttggatgccgctggtcgtcatcgggttgatgttagtgagaggactc
tctggatttgtttccagctactgtgtcgcttgggtttcaggcaaagtggtgatgaacatg
cgccgccgcttgttctcccatattatggggatgcctgtcgcgttcttcgatcagcagtca
acaggaacactactctcgcgcatcacctatgattccgaacaggttgcggcttcgtcatct
ggtgcgttgattacagtcatcagagaaggggcatcgattatcggcctgttcattctgatg
ttctactacagttggcaattgtccatcattctgattgtgattgcgccgattgtatcgatc
gccatgcgcgtggtgtccaaacgatttcgcagtatcagtaaaaacatgcagaatacgatg
gggcatgtaaccaccagcacggagcaaatgcttaaagggcataaagaagtactgatgttt
ggcggccaggacgttgagactaaacgttttgaccaggtcagcaaccggatgcgtcaacag
ggtatgaaaatggtatccgcgtcgtcgatttccgatcctgttattcagctgattgcttcg
cttgcgctggcatttgtactgtatgccgccagcttccctagcgtgatggagacattgact
gccggtaccatcacagtggtgttctcttccatgattgccctaatgcgtccgctaaaatct
ttgaccaatgtgaacgcacagttccagagcgggatggccgcgtgccagacgctgttcgcg
attctggatatggaacaggagcgcgacacgggtaaacgcgaaatcgagcgcgcgcaaggt
gaactcgaattccgccaggtgagttttgcttaccctggaagagaaaatctggcattaaaa
aatattaacttgcatatccctgtagggaaaacggtggcgttggttgggcgctctggttcg
ggtaaatcaacgattgccagtttgatcacgcgtttttacgatattcaatcaggagaaatt
ctacttgatgggcacgatctacgcgagtatcgcctgtcgtctttgcgtaatcaggtggcg
ctggtttctcaaaacgtgcatctgttcaacgatacgatagcgaacaatatcgcttatgca
cgcaatgagcactatagccgtgaagaaattgagcgtgcggcgaaaatggcctatgcgatg
gatttcatcaataagatggaacatggtttggatacgatcattggtgaaaatggcgtaatg
ctttccggtggacagcggcagcgtatcgcaattgcccgcgcgctactgcgtgatagtccg
atcctgatattggatgaagctacgtcggcgctggacacggaatctgaacgagcgatccag
gctgccttagacgaactgcaaaaagatcgtacggccttggtgattgcacaccgtctctcc
acgattgaaaaagcggatgagattctggtggttgaggacggcagaatcatcgaacgtggt
aaccatgttgcactcctggcggagaacggtgcctacgctcagttgcatagaatgcagttt
ggcgaatga
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