Pectobacterium aroidearum: I2D83_09710
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Entry
I2D83_09710 CDS
T07244
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00541
Biosynthesis of various nucleotide sugars
pari01100
Metabolic pathways
pari01250
Biosynthesis of nucleotide sugars
Module
pari_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I2D83_09710 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pari01005
]
I2D83_09710 (kdsB)
Enzymes [BR:
pari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
I2D83_09710 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
pari01005
]
Lipid A
I2D83_09710 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
DUF2683
Motif
Other DBs
NCBI-ProteinID:
QPI44813
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Position
2161858..2162610
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AA seq
250 aa
AA seq
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MTYTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVETAVKQ
AGGEVCLTRADHNSGTERLAEVIERYGFTDDDIIVNVQGDEPLIPSVIIRQVAENLAASK
AGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATIPWDRERFAQSKETIGDHFLR
HLGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL
ARVRHVMANR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacctataccgtgatcattcctgcgcgttttgcgtcaagccgactgccgggtaagccg
ttggcggacatcaacggtaaaccgatggtcgtccatgtgatggagcgggcgctggaatcg
ggagcgcagcgcgtgattgtcgccaccgaccatcctgatgttgaaacggccgtgaagcaa
gctggtggtgaagtgtgcctgacccgtgccgatcataattccggtacggagcgcttggct
gaagttatcgaacgctacggttttactgacgatgacatcatcgttaacgttcagggcgat
gagccactcattccttccgtgatcattcgtcaggtggcggaaaacctcgcggccagtaaa
gcgggaatggcaacgcttgcggtgccgattgaaaccagcgaagaagcattcaacccgaat
gcagtaaaagtggtaaccgacgcggagggatatgcgctgtatttttctcgtgcgacgatc
ccttgggacagagagcgttttgctcagtctaaggaaactattggcgatcatttcctgcgt
catctcggcatctatgcctaccgtgccgggtttgtgcgtcgttatgtcagttgggcaccg
agccaactggagcaaatcgaattactggaacagctgcgcgtgctatggtacggcgagaag
attcacgttgcggttgcgaaagcggtgcctagcgtcggtgtggatacgccagaagatctg
gcgcgtgtgcggcacgttatggctaatcgctaa
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