Pectobacterium aroidearum: I2D83_13050
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Entry
I2D83_13050 CDS
T07244
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
pari
Pectobacterium aroidearum
Pathway
pari01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
I2D83_13050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pari01002
]
I2D83_13050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pari01011
]
I2D83_13050
Peptidases and inhibitors [BR:
pari01002
]
Cysteine peptidases
Family C82
I2D83_13050
Peptidoglycan biosynthesis and degradation proteins [BR:
pari01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
I2D83_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
QPI41427
LinkDB
All DBs
Position
complement(2922049..2923071)
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AA seq
340 aa
AA seq
DB search
MKRALTLLGMAFAAYLTSTAAKATEYPLPPPNSRLIGENIAYTVPNDGRPLEAIAADFKI
GLLGMMEANPGVDPYLPKAGSTLTIPTQMLLPDTPREGIVVNLAELRLYYYPKGKNTVIV
YPIGIGQLGRNTPLMTTSVSEKRENPTWTPTANIRKHYLEEQGIKLPAVVPAGPDNPMGL
HALRLSAHGGVYLLHGTNADFGIGMRVSSGCIRLRPDDIKALFDNVPVGTRVQILNDAIK
TSVEPDGKRYVEVHQPLSKTDKDDPQTMPIPLTAKTQKFVKDAETDSKAVADAIVRRSGM
PIVVSVGQDINTYQPPVESAPEAPETHQAAPITAISTTSR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcgttaactttacttggtatggctttcgcggcatacctgaccagcaccgcc
gctaaagcgacggaatacccgctaccgccaccaaatagccgcctcatcggcgagaatatc
gcttatacggtccccaatgatggtcgtccgctggaagctatcgcggcggatttcaagatt
ggtttattgggcatgatggaagcgaatccaggcgtggatccttacctgccgaaagcgggt
tccacgctcaccatcccaacgcaaatgctgctgccggataccccgcgtgaaggtattgtg
gtcaatctggcggagctgcgcctctactactacccgaaagggaagaataccgtcattgtg
tacccgatcggcattggtcagttggggcgcaatacgccactgatgacgaccagcgtgagt
gagaagcgtgagaacccgacctggacgccaacggcaaacatccgcaagcattatcttgaa
gagcagggcattaagctgccagctgtcgttccggctggaccggataacccaatgggattg
catgcgctgcgtctgtccgcgcacggcggcgtttatctgctgcacggtacgaacgcggac
ttcggcatcggtatgcgcgtaagttccggctgtatccgtctgcgtccggatgacattaag
gcgttgttcgacaacgtgccggttggtacgcgagtgcagattcttaacgatgcaattaaa
acctccgttgaaccggacggcaaacgttacgttgaagtgcatcagcctctgtcgaagacc
gataaagacgatccacaaaccatgccgattccgctgacggcgaagacgcagaagtttgtt
aaagatgcggagacggacagtaaagcggttgctgatgcgattgtgcgccgttcaggcatg
ccgatcgtggtgagcgtaggacaagatatcaatacctaccagccaccggtagaatcagcg
ccagaagcgcctgagacgcatcaggctgcaccgatcacggctatcagtactacctcgcgt
taa
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integrated database retrieval system
