Pectobacterium aroidearum: I2D83_13470
Help
Entry
I2D83_13470 CDS
T07244
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pari
Pectobacterium aroidearum
Pathway
pari02020
Two-component system
pari02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I2D83_13470
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
I2D83_13470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pari02035
]
I2D83_13470
Bacterial motility proteins [BR:
pari02035
]
Flagellar system
Chemotaxis proteins
MCPs
I2D83_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
HAMP_2
ApoO
DUF4064
ZapG-like
ATG14
OVT1
Motif
Other DBs
NCBI-ProteinID:
QPI41505
LinkDB
All DBs
Position
complement(3012715..3014379)
Genome browser
AA seq
554 aa
AA seq
DB search
MSLSNWRIGYRLGAGFSFLVLMLLVIGSVAISKLSDFHEKMDEIVSQNYPLTVKSNKLID
ELNGYLNNQQLLLLLKSESEINKQLALNKERSGKISELMEYLNQSVSDDKSVAVLRDIGD
IRRDFLGSANKLSSLISAGNTEAASEEYFNVTRVTQEKYTNKVNEFIGIQDDKMSSSAQA
VGESYKNALMVLATIILISALAGLIIASLITRSVTQPLQEALGVAENVAKGDLTSEIYTD
RKDETGQLLSALNNMNSSLRQIVSQVRDGAETISSAASQIAAGNQDLSARTEEQASSLEE
TASSMEQLTSTIRNTADNTTQATDLAASASETVKKSGAMMETVTQEMRGIRDSSQRMAEI
IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRALAQRSATAAKEIKELIDDS
FKKVQDGMGLVEETGVTMNSLVTNVQGVTGIISEIAQASREQSDGINQINLAVGQIDTTT
QQNAALVEESAAAALSLQDQANSLARTVSVFNLGASYKSAALSRKVETPALSAPKNNRAE
KTAAKGELADWTTF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatccaactggcgtatagggtatcgattaggggcggggttctcttttctggta
ttaatgcttttggtaattggcagcgttgccatttcaaaattaagtgactttcacgaaaaa
atggatgagattgtttcgcaaaattatccattgaccgtcaaaagtaataagctgattgat
gaattgaatggttacctcaataatcagcaactgttgttattacttaaatcagaaagtgaa
atcaataaacagttggcgctgaacaaagagcgttcaggaaaaatatctgaactcatggag
tatctgaatcagtccgtcagtgacgataaatcggttgcggtactgcgtgatattggtgat
atccgccgcgatttccttggttcagcgaacaaactttcgtcattgatctcggcagggaac
accgaagccgcatctgaagagtacttcaacgtaacgcgtgtgacacaggaaaaatacacc
aacaaagtcaatgaatttatcgggatacaggatgacaagatgtcatcctctgcgcaagcg
gtgggggaaagctataaaaatgcgctgatggttctcgccacgattattctcatcagtgcg
ctggctgggttgattattgcttcactgattacccgcagcgtgacccagccgctacaggaa
gcgctgggcgttgctgaaaatgtcgcgaaaggcgacttgacctctgagatttataccgat
cgtaaagatgaaaccggccaactgttatctgccttgaacaatatgaacagcagtctacgg
cagattgttagccaggtgcgcgatggcgcagaaacgatctccagcgctgcatcgcaaatt
gcagcagggaatcaggatttatcggccagaacggaagaacaggcaagctcgctggaagaa
acagcgtcatcgatggaacaactgacgtcaacgatcagaaataccgccgataatacgacg
caggcaacagatctggcggccagcgcgtctgaaacggtgaagaaaagcggcgccatgatg
gaaacagtcacgcaggaaatgcgtggaatccgtgattcttcacagcgtatggcagaaatt
atcggggtgatcgatggtattgccttccagaccaacattctggcgctgaatgcggccgtt
gaagcggcacgtgccggtgaacagggaagagggtttgccgttgttgccagtgaggtacgt
gcgctggctcagcgaagcgctacggcggcaaaagaaatcaaagagcttatcgatgattca
ttcaagaaagtgcaggacggcatggggctggtagaagaaacgggtgtcacgatgaattca
ctggtgacgaatgtgcagggcgtaacaggaattatcagcgaaattgcgcaggccagccgt
gaacaaagcgatggaatcaaccagatcaacctggccgtggggcagattgatacgacaacc
cagcaaaacgccgcgttggttgaagaatctgctgctgccgcgctctctttacaggatcag
gcaaatagcctcgcgcgtacggtcagcgtattcaatcttggtgcatcttataaaagtgcg
gcattgagtagaaaagtggaaacacctgcgctgtcagcccctaaaaataaccgtgcagaa
aaaaccgctgctaaaggtgagttagcggactggacgacgttctaa
DBGET
integrated database retrieval system
