Pectobacterium aroidearum: I2D83_15870
Help
Entry
I2D83_15870 CDS
T07244
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_15870 (phrB)
Enzymes [BR:
pari01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I2D83_15870 (phrB)
DNA repair and recombination proteins [BR:
pari03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I2D83_15870 (phrB)
Prokaryotic type
I2D83_15870 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QPI41930
LinkDB
All DBs
Position
complement(3544980..3546473)
Genome browser
AA seq
497 aa
AA seq
DB search
MTTHVATHHAATHLVWLRNDLRITDNLALFAACQDPNATVLAVFIATPAQWGKHDMAPRQ
ATFLLENLTSVQHALAEKGIPLHYHECADFAASVDWLVQFCAQQQATDLFYNYQYEINER
LRDKQVKDRLADSVVCHGYHDSLLLPPGSVLTGNGEMYKVFTPFRQAFIKRLLEAETTCV
PAPDARGEPIHNMTALAPFSYPQREVDSDDFPCGERAALQQLRRFCREQVQDYDQQRDVP
ALPGTSKLSPYLALGIVSPRQCFNRLRAECPDMLERREGGAFTWFNELVWREFYRHLIVS
WPQLCKHRPFTAWTQWVKWRESSEDLAAWQKGKTGYPIVDAAMRQLNETGWMHNRLRMIC
ASFLVKDLLIDWREGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGER
FDPEGRFIRHWLPELAAVPDKDIHQPHRWADKHHHQLNYPLPIVDHKTARQNTLAAFEAA
KNIGMADNDREENNKYA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgactacgcatgtcgctacacatcatgctgctacacatttagtctggctgcgcaacgac
ctgcgcattaccgataatctggcgctgttcgcggcctgtcaggatccgaatgccaccgtg
ctggccgtctttatcgcgacgcctgcacaatggggaaagcacgatatggcgccgcggcag
gcgacctttctgctggaaaatctgacgtcggtgcagcacgcgctggccgagaaagggatc
ccgctgcactaccatgaatgtgctgactttgcggcatcggttgactggctggtgcaattt
tgtgcgcagcagcaggccaccgaccttttctacaactatcagtatgaaatcaacgaacgc
ctgcgtgataagcaggtaaaagatcggctggcggatagtgtggtttgccacggctaccat
gacagtctgttgctgccgccgggcagtgtgcttacgggcaacggcgagatgtataaagta
tttacgccatttcgtcaggcttttatcaaacgactgttggaagcggagacgacatgcgtg
ccggcaccggacgcgcgcggtgaacctatccataatatgacggcactggcgccgttcagc
tatccgcagcgcgaggtggatagcgacgatttcccctgtggtgaacgtgcggcgttgcag
caattgcgccgtttttgccgcgaacaggtacaggattacgaccagcagcgggatgtcccg
gcgctgcccggcaccagcaagctttctccctatctggcactggggatcgtctcgccgcgc
caatgttttaatcgtctgcgcgccgagtgcccggatatgctggaacggcgtgaaggcggg
gcgtttacctggtttaacgagctggtctggcgcgaattttatcgtcacctgatcgtgtcc
tggccgcagctgtgtaaacaccgtccgtttaccgcctggacgcagtgggtgaaatggcga
gaatcatcagaggatttagccgcctggcagaagggtaaaaccggctacccgattgtggat
gcggcgatgcgtcaactgaatgaaacgggctggatgcacaatcgcctgcgtatgatctgc
gccagttttctcgtcaaagatttgctgatcgattggcgtgaaggcgaacgctactttatg
tcgcaactgctggatggcgatctggcggcgaataacggcggctggcagtgggcggcatcg
acaggtaccgatgctgcaccttattttcgcatttttaacccgacaacgcagggcgagcgc
ttcgaccctgaaggtcggtttattcgtcactggctgcctgaactggctgccgtgccggat
aaagatattcatcagccccatcgatgggctgacaaacatcatcatcagctgaactatccg
ctgcctatcgtcgaccacaaaaccgcacgtcagaacacgctggcggcgtttgaggcggca
aaaaatatcggtatggcggataacgatcgagaagagaacaataagtatgcgtaa
DBGET
integrated database retrieval system
