Pectobacterium aroidearum: I2D83_16220
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Entry
I2D83_16220 CDS
T07244
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pari03000
]
I2D83_16220
Transcription factors [BR:
pari03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I2D83_16220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
EcoRI
Motif
Other DBs
NCBI-ProteinID:
QPI41988
LinkDB
All DBs
Position
complement(3614169..3615068)
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AA seq
299 aa
AA seq
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MNLSIKQLRAFIALTETDNFTRAAQKINLSQPAFSSLIAGLEEEVGYRLFDRDTRKVQLN
ADGLHFIDIARRLVQTHDDAVGEIKSYATGYKGKIVLAVLPSMAVEWLPQVLAQYHRAYP
KIKVELLDTQWDRCLKAVLDGRADLALTAGQPSPGTFSSHMLFADSFYLICQNSHPLAQR
DSVDVADVAQYPFVGFCKGTSIRQYTDQLIEPEGFNYVLEVRQLTTMMGLVAANYGVSIV
TGLTLFQFQHKDIAIIPFRDLSLQRGIYLVTDRERQLSVCAKEFYDFLLERAESFVPAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatcgataaaacaattacgagcctttatcgcgttgacagaaaccgataatttc
acgcgcgctgctcagaaaataaatctctctcagccagcatttagttcattaatcgccggg
ttggaggaagaggtcggctataggctatttgatcgcgatacacgtaaagtgcaactcaac
gccgatggccttcatttcattgatattgcccgtcggctggtgcaaacccatgatgatgcc
gtcggtgagatcaagtcgtatgccacggggtacaaggggaagattgtgctggcggtattg
ccgtcaatggcggtggaatggttgcctcaggtgctggcgcaatatcaccgtgcttatccc
aagattaaggttgaactgctggatacgcagtgggatcgctgcctgaaggcggtgctggat
gggcgcgccgatctggcgctgacagcagggcagccgtcgccgggaacgttcagctctcac
atgctgtttgccgacagtttttatctgatctgccagaactcgcacccgctggcgcagcgc
gacagtgttgatgtggccgatgtggcgcaatacccgtttgtcgggttttgcaaaggcacc
agcattcggcagtacaccgatcagcttatcgagccggaaggttttaactacgtgctggaa
gtgcgtcagttgaccaccatgatggggctggtggcggcaaattatggtgtgagtattgtg
acggggctgacgctgttccagtttcagcacaaagacattgcgattattccgtttcgggat
ttatcgctgcagcgcggtatctatctggtgacggatagggagcgtcagctttccgtatgt
gcgaaagagttttatgattttcttctggagcgggcggaaagttttgttcccgccgcgtga
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