Pectobacterium aroidearum: I2D83_16460
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Entry
I2D83_16460 CDS
T07244
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pari03032
]
I2D83_16460 (gyrA)
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_16460 (gyrA)
Enzymes [BR:
pari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I2D83_16460 (gyrA)
DNA replication proteins [BR:
pari03032
]
Prokaryotic type
DNA Topoisomerases
I2D83_16460 (gyrA)
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I2D83_16460 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QPI42032
LinkDB
All DBs
Position
complement(3669836..3672475)
Genome browser
AA seq
879 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPSPAEAKASLIAQAWELGSV
AAMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKA
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTSL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVNEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGVVKVEGEIAEDDDAIDDIDGDDDIAEDDE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtcaacattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattaccagatgttcgtgatgga
cttaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggcaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactcagccgtttatgaaaccatcgtgcgtatggcgcagcctttctcactgcgctac
atgctggttgatggtcagggtaacttcggttcgattgacggcgactccgcggcggcgatg
cgttataccgaaattcgcatgtcgaaaattgctcatgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcca
acgcgtattcccaacctgctggttaacggttcttccggtatcgccgtcgggatggcaaca
aacattccaccgcacaacctgacggaagtcgtgaacggctgtctggcgtatatcgacgat
gaaaacatcagccttgaaggactgatggaacacatcaaaggcccggacttcccgacagcg
gcgatcatcaatggccgacgcggtattgaagaagcttatcgcaccgggcgcggtaaaatt
tacatccgtgcgcgtgctgaagtggaagcggacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaattgccgagctg
gttaaagacaagcgtatcgaaggcatcagcgcactgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgagattaagcgtgacgccgtgggtgaagtggtcctgaataatctg
tattcccagacgcagcttcagacctcattcggcatcaacatggtcgctctgcatcagggc
cagccgaagatcatgccgctgaaggacattctggttgcatttgtgcgccaccgccgcgaa
gtggtgacgcgtcgtactatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtttggcgattgcgctggcgaacatcgatccgattatcgaactgattcgccgtgct
ccatcacctgctgaagcgaaagcttcgctgatcgcacaagcatgggaactgggcagcgtg
gcggcaatgctggaacgtgcgggcgatgatgccgcgcgtccagagtggctggagccggag
ttcggcatccgtgatggtcgctactacctgacggaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgaccggcatggagcacgaaaagctgctggatgaatataaagcg
ctgctggcggaaatcgccgagctgctttatatcctcaacagccctgagcgcctgatggaa
gttatccgcgaagagctggaagcgattaaaacccagtacagcgatgagcgtcgtacggaa
atcacggcgaacagcgccgacatcaacatcgaagatctgattaatcaggaagatgttgtc
gttacgctgtctcatcagggttacgtgaagtatcagccgctgagcgattacgaagcacag
cgccgtgggggcaaaggtaaatctgccgcgcgtataaaagaagaagactttatcgatcgt
ctgctggtggcaaacacccacgacacgattctgtgcttctccagccgtggtcgtctgtac
tggatgaaggtgtaccaactgccagaagccagccgtggcgcgcgcggtcgcccgatcgtc
aacctgctgccgcttgaagcggatgagcgtatcaccgcgattctgccggtacgtgaatac
gaagaaggccgccacatcttcatggcaaccgcgagcggtactgtgaagaaaacgtcgctg
acggaattcagccgtccgcgcagcgcggggatcatcgcggttaacctgaacgaaggtgat
gagctgattggcgtcgacctgaccgatggcagcgacgaagcgatgctgttctctgcggaa
ggtaaagtggttcgcttctccgaacaggcggtgcgctctatgggccgcacggcaacgggt
gttcgtggtatcaatctgcaaggtgaagatcgcgttgtttcgctgatcattcctcgtggc
gaaggcgatatcctgaccgttacgcaaaatggctttggtaagcgtactgccgtgaacgag
tacccaaccaagtcgcgtgcgacgaaaggggttatctctatcaaggtcagcgaacgtaac
ggtaaagtggttggcgcggttcaggttgatgccgcagaccagatcatgatgatcaccgat
gcgggaacgctggtgcgtacgcgcgtgtctgaagtcagcatcgttggccgtaacacgcag
ggcgtgacgctgattcgtacggcggaagacgaaaatgttgttggcctgcagcgtgtagcc
gagccggtagaagatgaagagctggatggcgtagtaaaagtcgaaggcgagatcgccgaa
gatgatgatgctatcgacgacattgatggcgatgatgatatcgcagaagatgacgaataa
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