Pectobacterium aroidearum: I2D83_16930
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Entry
I2D83_16930 CDS
T07244
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_16930 (sbcD)
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I2D83_16930 (sbcD)
Archaeal homologous recombinant proteins
I2D83_16930 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QPI42122
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All DBs
Position
3778437..3779675
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AA seq
412 aa
AA seq
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MRIIHTADWHLGQYFYTKSRAAEHQAFLHWLIAQVEQHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVELQRTGCQLIILGGNHDSVAMLNESRDLLACLNTRVIACASDDPVQQVLLLE
NRQQQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGATASESVRDIYIGSLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFTPDASPPIPPQIDTLPIPVTQPMQLIKGSLSDIE
RQLSAFQHYQGDKPVWLDIEISTQDYLSDMQKRIQAMTENLPVEVLLLRRTREQRLQAMT
RQDKETLNELSVHDVFERRLATETDMEEGRQQRVRTLFNQVIDELENSETAK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttaggacaatatttttataccaaaagccgc
gcggctgaacatcaggcttttcttcactggctcatcgctcaggtggagcagcatcaggtc
gatgccattatcgtcgcaggcgatatttttgataacggttctcccccgagctatgcccgg
gaaatgtattatagcttcgtagtagaactacagcgtacaggctgccagctcatcattctc
ggtggaaaccatgattccgtcgcgatgttaaatgaatcccgtgatttgctggcctgcctg
aacacgcgcgtgattgcctgcgccagcgacgatcccgtccaacaggtgctcctgctggaa
aaccgtcagcagcagcccggcgccctgctctgcgccattccctttttacgcccgcgcgat
gtattgaccagcaaagctggacagtccggtgatgaaaaacagctggcgctacaagaggcc
atcacggcgcactaccagcagtgttaccaactggcttgccaaaaacgcgatgaactcggc
ctgccgctgccgattatagccaccgggcacctgacgacaattggtgccaccgcctccgaa
tccgtgcgcgatatctatatcggttcgctcgatgcgttccctgctcaggcttttccccct
gcggattatatcgcgctcggccatattcaccgcccgcagcgcgtgactcaaagtgagcat
atccgctacagcggttcgcctattccgctaagttttgacgaactcaacagtgagaaatct
gtttgtctggtcagttttacaccagacgcgtcgccgccaattcccccgcagatagatacg
ctgcccatccccgtcacccagccgatgcagttgattaagggcagtctgagtgacattgaa
cgacagctgtccgcgttccagcactatcagggtgacaagcccgtgtggctggatatcgaa
atcagcacacaggattatcttagcgacatgcagaagcgcattcaggcaatgaccgagaac
ctgcccgttgaggtgcttctgctacgccgcacgcgtgagcaacgtttacaggcgatgacc
cggcaagataaagaaacgctgaacgagctcagcgtacatgacgtttttgaacgtcgtctg
gcaacggagacagacatggaagaaggccgccagcagcgggttcgcaccctgtttaatcag
gttattgatgaactggaaaatagcgagactgccaaatga
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