Pectobacterium aroidearum: I2D83_16935
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Entry
I2D83_16935 CDS
T07244
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_16935
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I2D83_16935
Archaeal homologous recombinant proteins
I2D83_16935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
SMC_N
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPI42123
LinkDB
All DBs
Position
3779672..3783355
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGQLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKPDDRAELLEELTGTD
IYGLISERVYDKHKQANVTLNTLQARASGIQLLTDEQRQQVEAQLAELIQQEQQGNVERE
QALTTLRWFEQLTQQQTSVTHTQAQYTSAESAIQQARPQLDKLANSEPAEKLRPLHQDKE
RYRQASLALAQQIEQLNGKLAAEQLALRTLRQQEEKAEQDVSEHKQIRQQQEQLINEQVV
PLDHRIATLEQQKNQQQDELAKTQARLHADEAKQTQVAAEQQQAKRQLEQIQSYRQQHAH
HQQWGELLPLWRTQFRQLHQLQDEHQKLNQKQAQHTAESTARQQEADNLAAQQREQQKVV
DAVRQQFTQHDETRQHQDTHQPLSTLHQRFNQLMDQQATCRQLATVSDQYQRLQVRKQQH
LAKLVEAQGHIDQSEILQKQQQSEHQQRSERLADLETIYRQEVHIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQRRLTALQQDVNQLTIALANTTAELNARLQQREQLQS
ELAQCDSEHQALLQHWQSVSERLQVSYSLEQQDEIAVWLTQREAEEQAIRQQIAAREQSQ
KLWQESKDLLTAAEALLRDLEQKIALNAQQQTSLGVTQEETTQSLQNVHQQITQHTQDIT
QTLATVGLLPPDTDTQDGWLAQRDSEWQNWKAKEQEQSRLTPLLATLESDLQHLRHSVSE
ATQHIQTQQQQLAQHLAQLNTSQQERQVLFGDKQITDVREQLQRTSQQYDDALRFAQSSR
QQTETALSRLTGELASTQQQYEQSTRQHESATERFTLALQQSTFVDETAFLHALLDEQER
QTLQEFKETLHQRLQQAATLRQQAEQTLLEHQQKRPASLTEDATQEAIQQQLDALDDTLK
TNLRQQGEFQRQLSDDKQQRQNQQDLLNEIAQSQQKNDDWETLNSLIGSSKGDKFRKFAQ
GLTLDHLVYLANLQLSRLHDRYQLKRKPGGDLELLVMDTWQADAERDTKTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgcttaaagaacctcaacgcgctgaaaggcgaatggaagatc
gacttcacgcaggagcccttttccagcaatggcttatttgcgattaccggccccactggc
gcgggaaaaaccacgctgctggatgccatctgtctggcgctttaccacgaaacgccgcga
ttgggtcagctttccgccagtcagaatgacctgatgacgcgtaataccgcagagtgcctt
gctgaagtcgagtttgaggtgaaaggtgtcggataccgcgccttctggagccagcgtcga
gcaagaaatgcgccagacggcaacttacaatcccccaaagccgaacttgcgctcattgaa
gacggcaaaattctgtgtgaaaaactcaatgataagaaagagatgatcacacagctcacc
gggctggatttcggccgtttcacgcgatccatgatgctatcgcagggccagtttgccgcc
ttcctcaatgcaaaaccagatgaccgcgcagagctactggaagagctgaccggcacggat
atctatggcctgatatctgagcgcgtctatgacaagcacaagcaggcaaatgtcacattg
aacacgctacaggcgcgtgcatccggtattcagctgttgaccgatgagcagcgtcagcag
gtggaagcacagcttgccgaactgatccagcaggaacaacagggcaacgttgagcgtgag
caagcactgactacgctacgctggtttgagcaactaacgcagcagcaaacgtcggtaact
catacgcaggcgcaatacacgagcgccgaatccgccattcagcaggccaggccgcagctc
gacaaattagccaatagcgaaccggcagaaaaactgaggccgctacatcaggataaagag
cgctatcggcaggcgtccctggcactcgcccagcagattgaacaactcaacggcaagctg
gccgcagaacagctggcgttaagaacgttacgtcagcaagaagaaaaagcggaacaggac
gttagtgagcacaagcagatacgacaacagcaagagcaactgatcaacgagcaggttgtg
ccgcttgaccatcgcattgctacgctggaacagcaaaaaaaccagcagcaggacgaactg
gcaaaaacgcaggctcgcctgcacgccgacgaggctaaacaaacccaggtcgcagcagaa
caacagcaggctaaacggcagcttgaacaaatccagtcttaccgccagcaacatgcacat
catcagcagtggggagagctgttgcctctgtggcgcacccagtttcggcagctacaccag
ttacaggacgagcaccagaagctgaaccagaaacaggcacagcatacggcagagtcgacg
gcacggcagcaagaagccgacaatctggcggcacagcagcgtgaacaacaaaaagtcgtt
gatgctgtacgccagcagttcacgcaacacgatgaaacgcggcaacatcaggacacgcat
cagccactttccactctgcaccagcgctttaatcagcttatggatcagcaggcgacatgt
cgacaactcgccactgtcagcgaccaataccagcgccttcaggtgcgcaagcagcaacat
ctcgccaaactcgttgaggcacaaggccatatcgaccagtcagaaatattgcagaaacag
cagcagtctgaacatcagcagcgcagcgagcgtctggccgatttggaaacgatatatcgg
caggaagtgcatatcgttaagctggaagccgaacggcagcggttacaggccggagaggcg
tgcccgctgtgtggctcaaccgagcaccccgctatcgagcgatatcaggcactacaaccg
tctgaaacccaacggcgtctgacggcgttacagcaggacgtaaaccagttaaccatcgcg
ctggcgaataccactgctgaactgaacgcacgcttacagcagcgggagcagctgcaatcg
gaacttgctcaatgcgatagcgaacatcaggctctgctgcaacactggcaaagtgtcagt
gagcgcttacaagttagctactcgctggaacagcaggacgagatagccgtctggcttaca
cagcgtgaagccgaagaacaggccattcgacagcagattgccgcgcgcgagcagtcgcaa
aaactgtggcaggaaagtaaggatttactgactgctgcagaagcattattacgggatctc
gaacagaaaatcgcgctgaatgcccagcaacaaacttcgctaggcgttacgcaggaagaa
acaacgcagtcgctgcaaaacgtgcaccaacagatcacgcaacatactcaggacatcacg
caaacgctggcaacggtggggcttcttccgccagacactgacacacaagatggctggctg
gctcagcgtgacagcgaatggcaaaactggaaagccaaagagcaggagcagtctcgctta
acccctctgttagccacgctggaaagcgatcttcaacatctgcgtcacagcgtaagcgag
gcaacacagcacatccaaacgcagcaacagcagttggcacagcacctcgcgcagctcaac
acaagccaacaagagcgacaggtgctatttggggacaagcaaatcaccgatgtgcgcgaa
cagctacagcgaaccagccagcagtatgacgatgcactcaggttcgcccagtcatcccgt
cagcaaaccgaaacggcgttaagccgtctgacgggagagctggctagcacgcagcagcaa
tatgaacagagcacgcgccagcatgagagtgcaaccgaacgctttactctggcgttgcag
caaagcaccttcgttgatgaaaccgcctttctccatgcactgcttgatgagcaggaacgt
cagacgttgcaggaattcaaggaaacgctgcatcagcgcttgcagcaagcggcgacactg
cgccagcaggctgaacagacattactggaacatcaacaaaaacggccagcatccctgacg
gaagacgctacgcaagaagcgatacagcagcagttggatgcgctggacgacacgctgaaa
actaacctgcggcagcagggggaattccagcgtcagttatctgacgacaaacaacagcgc
cagaatcaacaggatttactcaacgagatcgcccaaagccaacaaaagaatgacgactgg
gagacgttaaactcgctgatcggctccagtaaaggggataaattccgcaaatttgctcag
gggctgaccttggatcatctggtctatctcgccaatctccagctttcacgcctgcacgat
cgctatcagctcaaacgtaagcccggtggcgatctggaacttctggtgatggatacctgg
caggcggatgccgagcgcgacacaaaaacgctatccggcggcgaaagttttctggtcagt
ctgtcgttggcgctggcgctgtccgacctggtcagccataaagccagtatcgactcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgctggatatcgcactggatgcg
ctggataacctgaacgcctcgggtaaaaccatcggcgtcattagccatgttgaagccatg
aaagagcgaattccggtacagatcaaagtgcagaaggttaacgggctcggcgtcagccgg
ctggcgccgcagtacgccgtttag
DBGET
integrated database retrieval system