Pectobacterium aroidearum: I2D83_17180
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Entry
I2D83_17180 CDS
T07244
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari03030
DNA replication
pari03430
Mismatch repair
pari03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2D83_17180 (dnaE)
03430 Mismatch repair
I2D83_17180 (dnaE)
03440 Homologous recombination
I2D83_17180 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pari03032
]
I2D83_17180 (dnaE)
03400 DNA repair and recombination proteins [BR:
pari03400
]
I2D83_17180 (dnaE)
Enzymes [BR:
pari01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2D83_17180 (dnaE)
DNA replication proteins [BR:
pari03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I2D83_17180 (dnaE)
DNA repair and recombination proteins [BR:
pari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I2D83_17180 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPI42168
LinkDB
All DBs
Position
complement(3850193..3853675)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADFCVESDELGDELAHLTILAMNNEGYQNLTLLISQAYQRGYGAAGPTIDRNW
LIEHREGLILLSGGRRGDVGRFLLRGNQTQAEQCLAFYQEHFPQRYYLELIRTSRPDEES
YLHAAVELATKHGLPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVECSKKGL
EERLEFLFPDPEVRAARRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKQGQEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKARGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggctaaagtcggtccgctggtaaaaaaggcggcggcacttggcatgccagcgctggcg
attaccgatttcaccaacctgtgtgggctggttaagttctatggtggcgcgcatggcgcg
ggcatcaagcctattatcggcgcagacttctgtgtcgaaagcgacgaattaggggatgaa
ctcgcgcatctcactatcttggccatgaataatgaaggctaccagaatctcacgctgctg
atttctcaggcttaccagcggggttatggtgctgccgggccgacaattgaccggaattgg
ctgattgagcatcgtgaaggactgattttactgtctggtggtcgccggggtgatgttggt
cgattcttgctgcgcggcaaccagacacaggcagagcagtgtctggcgttttatcaggag
cacttcccccagcgttactatctggaacttatccgcacgtcacgccccgacgaagaaagc
tatttgcacgctgccgtcgagttggcaacgaagcacgggctgcccgtggtggcgaccaat
gaagtgtgttttatcagcactgatgattttgacgctcacgaaatccgcgttgctatccac
gatggctacacgcttgacgaccctaaacgtccacgtaattacagcccgcagcagtacatg
cgttccgaagaggaaatgtgcgagctctttgctgatatccccgaagcgctggcgaacagc
gtagaaattgccaagcgttgtaacgtaacgattcgtctgggtgaatatttcctgccgcag
ttcccgacgggtgacatgaccacggaagactttctggttgagtgctcgaaaaaggggctg
gaagagcgcctcgaattcctgttccctgacccggaagtgcgcgctgcgcggcgaccagag
tacgatgagcgtctggatattgaactgggcgtgattaaccagatggggttccccggttac
ttcctcatcgtaatggaatttattcaatggtcgaaggataacgacgtgcctgttgggccg
gggcgtggttccggtgctggctcgctggtggcctatgcgctgaaaatcaccgatctggat
ccgctggaattcgacctgctgttcgaacgtttcctcaaccctgaacgtgtttccatgcct
gacttcgacgtcgatttctgtatggaaaaacgcgataaagtgatcgatcacgttgcggaa
atgtacggtcgcgatgcggtatcacagattattaccttcggtacgatggcggcgaaagcg
gttattcgtgacgtagggcgcgtgcttgggcacccatatgggtttgtcgatcgtatttca
aaactggtgccgcccgatccgggtatgacgctggaaaaagcctttgctgctgagccgcag
ctgccggaaatttatgaggccgatgaggaagttaaggccctcattgatatggcgcgcaag
ctcgaaggggtaacgcgtaacgccggtaaacatgcgggtggggtggtgatttcccccacc
aagattaccgatttcgcgccgttgtactgcgatgcagaagggaaccacccggttacccag
tttgataagaacgacgtggaatatgccggactggtgaagttcgacttcctcggcctgcgt
acgctgaccatcatcgactgggcgctggagatgattaacgcccgtcgcgcgaagcaaggt
caggagccgattgatatcgcggccattccgctcgacgataagaaaagtttcgacatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aaacgcctgaagcctgactgctttgaagatatgatcgctctggtggcgctgttccgcccc
ggcccgctgcaatccggcatggtggataacttcatcgaccgtaagcatggccgtgaagcg
atctcctatcctgatatcgaatggcagcacgagtcactcaagcctgtgttggagccgacc
tacggcattatcctgtatcaggaacaggttatgcagatcgcccaggtactggcgggttat
acgctgggcggtgcggacatgctgcgtcgtgcgatggggaaaaagaacccggtcgaaatg
gcaaagcagcgtggtggctttgaagatggtgccaaagctcgcggcgtgaacggcgaactg
gccgttaaaattttcgacctggtggaaaaattcgccggttacggctttaataaatcgcac
tctgcggcttatgcgctggtgtcttaccagacgctgtggctgaaggcacactatccggct
gaattcatggcggcggtaatgacggccgatatggacaacacggataaagtggtcgggctg
gttgatgaatgttggcggatggggttaaaaatcttgcctccggacatcaacagcggtctg
tatcacttccacgtgaacgacgatggcgagattgtttacggcatcggcgcgattaaaggc
gtgggtgaaggcccgattgaggcgattatcgaggcgcgtaatcagggcggttattttaga
gaactgtttgacctctgtgcgcgtaccgacattaaaaagttgaaccgccgcgtgctggaa
aaactgatcatgtccggggcctttgaccgcctggggccgcaccgtgccgcgctgatgaat
tcattagctgatgcgttgaaggccgccgatcagcatgcgaaagcggaagccattggtcag
gtggatatgtttggcgtgttggccgaggcgcccgagcaggttgaacaatcctacagcacc
gtgccaccgtggccggagcaggtcgtattggatggtgagcgggaaacgctggggctgtac
ctgaccggccacccgatcacgcaatatattaaggaaatcgaacgctatgccggtggcgtg
cgtttgaaagatatgcacccgacggatcggggtaaaatgaccactgccgttgggctggtg
ttggcggctcgcgtcatggtaaccaagcggggtaaccgtattggtgtctgtaccttggac
gatcgttccggtcggcttgagataatgctgtttaccgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgcgcccgactacgtttcggcgcagcatggcgtgtaacgcctgccgat
gcgctactgaacgagctgcgcacattagtgggtaatgagcaggtggaactggaatttgac
taa
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