Pectobacterium aroidearum: I2D83_18260
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Entry
I2D83_18260 CDS
T07244
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
I2D83_18260
Enzymes [BR:
pari01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
I2D83_18260
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
BPA_C
Motif
Other DBs
NCBI-ProteinID:
QPI42358
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Position
complement(4096334..4098064)
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AA seq
576 aa
AA seq
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MKRSVLLLVGAMLAPYSYSAQDNAVSLSVSGLNTVLDNGLLSVAFGEDGSAVRMVTGGKN
IVTNLSGAARDPSKTRSAYLDYYVNDVHAKGVKDFVPERVEVLRNDREMAHVAYIDERDG
LLRLEYHLIMRRGVSGLYSYVVAENRGSQDVKVSELRNVYRFDPARLDHLYNGDRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMVAPPGWKKFYGPWLLYINQGDTERMLADARR
QALTEAVSWPYQWVDDSRYVRDRTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQAT
IDTQGNFAISHVRPGNYHLAVYANSGTQPGILAEQTLSVSGDKQALPVIALPKAEPVIWA
IGQANRQASEFRFGDEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQ
PEKKNYFLNIALAAASNSGMSEPTMPQLAVAVNGKTLETLTYENDKTIYRGALQSGRYHV
ARIPVSSHLLKNGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggggccatgctggcgccctatagctatagcgcg
caggataatgcggtgtcgttatccgtttctggtttgaataccgtgctggataacggctta
ctcagcgtcgcatttggcgaggatggcagcgcggtgcgtatggtgacgggaggcaaaaat
atcgtcacgaatttgtccggtgcggcgcgcgatccgagcaaaactcgtagcgcttacctc
gattattatgtcaacgatgttcatgctaaaggcgtcaaagattttgtccccgagcgggta
gaggtgctgcgcaacgatcgtgagatggcgcatgtcgcctatatcgacgagcgggacggg
ctgttgcggcttgaatatcacctgattatgcgtcgcggcgttagtggactttacagctat
gtagtggcggagaatcgcggcagtcaggacgttaaagtcagtgaattacgtaacgtatac
cgcttcgatcctgcccggttagaccatctctataacggcgatcgtcagggtaaaccgctg
ctctacagccagcttgaagcctcgccgaaggtacaagatgaaacctggcggctaccggat
ggcagtatctattccaaatatgattttgctggctatatgcgtgctgcgcctttttggggt
gtttttggtaatggcgtcggggcgtggttgattcacggtaatcgggagtatttctccggt
gatgcgctcaagcaggatttactggtgcatcaggatgcgatcattttgaactacatgacg
ggttcacacttcggtacgccagatatggtagcgcctccgggctggaaaaaattctacggc
ccgtggctgctgtatatcaatcagggcgataccgagcggatgctggcagatgcccggcgt
caggcgctgacggaagctgtcagttggccgtaccaatgggtggatgattcccgctatgtg
cgcgatcgcacacaggttagcggacgcgttgccagccagcagccggtgacggtggtgctt
tcatcatcattggatgaaccgtttgatgtacaaacccgcggttattcgtatcaggcaacg
atagacacacaggggaattttgcgatttcccatgtccgtccgggcaattaccaccttgcg
gtctacgccaatagcggtacgcagccgggaatattggcggaacaaacgctgtctgtttct
ggtgataaacaagccctgccggtgattgctcttcctaaagccgaacccgttatctgggcg
attggacaggcaaatcggcaggcgagtgaattccgctttggcgacgaggcacgcaacacc
cgctggcaacatgaggtgccggccaatctgacgttcgatattggccgtagcgactatcaa
cgcgactggtattacgcgcagaccaaaccgggaaaatgggatatccgttttgccctgcaa
cctgagaaaaaaaactatttcctgaatatcgcattggcggcagccagcaatagcggcatg
agtgaaccgaccatgccacagctggcggtagcggtaaacggcaagacgctggaaacgctg
acttacgaaaacgacaaaaccatttatcgcggtgcgctacaaagcggtcgttatcacgta
gcccgcatccctgtgtcatcccacttgctgaaaaacggcaacaacacaatcacactgcaa
ttaaaaggcggcagcgtgatgtacgacgtagtgaccttaagcgaggagtaa
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