Pectobacterium aroidearum: I2D83_18435
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Entry
I2D83_18435 CDS
T07244
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pari03036
]
I2D83_18435 (xerD)
Chromosome and associated proteins [BR:
pari03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
I2D83_18435 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
T4SS_TraI
Motif
Other DBs
NCBI-ProteinID:
QPI42388
LinkDB
All DBs
Position
complement(4140913..4141812)
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AA seq
299 aa
AA seq
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MQEHDQALIEQFLDALWLERNLAENTLASYRLDLRTLAEWLAHHDNDLLQAQALDLQAFL
ADRVDGGYKATSSARLLSAMRRFFQYLYREKLRSDDPSAVLSSPKLPQRLPKDLSEAQVD
ALLNAPSIEQPLELRDKAMLEVLYATGLRVSELVGLTMSDVSLRQGVVRVLGKGNKERLV
PLGEEAVYWIEYYLEHGRPWLLNGQTLDVLFPSNRARQMTRQTFWHRIKYYAVLASIDSE
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacacgatcaggcgcttatcgaacagtttctcgatgcgctgtggctggaaaga
aatctggccgagaatacgctggcgtcttatcggttggatctgcgaacgcttgcggaatgg
cttgcacatcatgataacgacttattgcaggcgcaggcgctcgatcttcaggcgtttctc
gccgatagggttgatggcggctacaaggcgaccagttcggcccgtttgttgagcgcgatg
cgtcgcttcttccagtacctttatcgggaaaagctgcgcagcgacgatcccagtgcggtg
ctatcctccccgaaactgccgcagcgtctacccaaagatttgagcgaggcgcaggttgat
gcgttgcttaacgcaccaagcattgaacagccgctggaattacgcgataaggccatgctt
gaggtattgtatgcgacggggctgcgtgtttctgagctggtcggtttgacgatgagcgat
gtcagcctgcggcagggcgtggttcgcgtgctgggaaaaggcaataaagaacgattggtg
ccgctcggtgaagaagcggtgtactggatcgagtattatctggaacatggtcgcccgtgg
ctgctgaatgggcaaacgctcgatgtgctgtttcccagcaatcgagcacggcaaatgacg
cgccagacgttctggcaccgtatcaagtattatgcggtactggcgtccatcgacagcgaa
aagctctcaccgcacgtcttgcgccacgcgtttgctacccatttattgaaccacggcgcg
gatttacgggtcgtacagatgctcttggggcacagcgatctttccacgacgcagatttac
acccatgtggcgacggagcggctgaaacagcttcaccagcagcaccatccgcgcgcatag
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