Pectobacterium aroidearum: I2D83_18720
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Entry
I2D83_18720 CDS
T07244
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pari03016
]
I2D83_18720 (truB)
Enzymes [BR:
pari01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I2D83_18720 (truB)
Transfer RNA biogenesis [BR:
pari03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I2D83_18720 (truB)
Prokaryotic type
I2D83_18720 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QPI42437
LinkDB
All DBs
Position
complement(4200260..4201204)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATELEQALEGFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLATLVEQAQAQELSPSLSLDPL
LMPMESPVIDFPEVNLTPVVAGYLKLGQPVQAANAPLNGMVRITEGDAHTFIGMGEIDGD
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgccgtggccgtgatgtacacggcgtattgctattagataagccg
cagggcgtgtcgtctaatgatgttttacagaaggtaaaacggatttttaacgctaacaga
gcgggccacacgggggcattggatccattagccaccggtatgttgccgatttgccttggg
gaagcgacgaaattttcccaatacctgctggattcagataaacgctaccgtgttattgct
cgacttggacagcgaaccgacacctctgatgccgatggcaacgtgattgaagaacgagcg
attggtttttctgctacggaactggagcaggcgctggagggctttcgtggcaccacgcag
caagtgccatccatgtactcagcgctgaaataccaggggcgtaagctgtatgagtatgcc
cgtcaggggctgactgttccgcgtgaagcacgtgaaatcaccgtgtacgaactgcagttc
attcgttgggaaggggatgagctggagctggaaatccactgttctaaagggacatacatc
cgtaccattattgatgatttgggcgaaaagctgggctgtggcgcgcatgtgatttacctg
cgtcgtttgcaggtggctacgtatcctatcgaaagaatggtaacgctggagcagttggcc
acattggtcgagcaggctcaggcacaagagctttcgccttcgctgagtctcgatccgctg
ctcatgccgatggaaagcccggtcattgattttcctgaagtgaatttgacgcccgttgtc
gccggttatttgaagctggggcagcccgttcaggccgcgaatgcgccgttgaacggtatg
gtgagaatcaccgaaggcgacgcgcacacgtttatcggtatgggtgaaatcgacggcgat
ggtcgcgttgcgccacggcgtctggttgttgagtatccggtgtaa
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