Pectobacterium aroidearum: I2D83_18855
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Entry
I2D83_18855 CDS
T07244
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00550
Peptidoglycan biosynthesis
pari01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I2D83_18855 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pari01002
]
I2D83_18855 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pari01011
]
I2D83_18855 (dacB)
Enzymes [BR:
pari01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I2D83_18855 (dacB)
Peptidases and inhibitors [BR:
pari01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
I2D83_18855 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pari01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
I2D83_18855 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QPI42461
LinkDB
All DBs
Position
4234716..4236149
Genome browser
AA seq
477 aa
AA seq
DB search
MRFSSIVTGLACAFVLHANAASVEDHRQYLPDGANLALLVQKVGSTTPSMAFNSQQMALP
ASTQKVITALAALLQLGPDYRFVTTMESHGPVTSGILNGNLIVRFSGDPTLKRQQIRNMV
QELRKRGIKEIAGDVLIDTSVFASHDKAPGWPWNDMTQCFSAPPGAAIVDRNCFSVSLYS
APKAGDNAFIRVASYYPVQMFSEVRTLAKGSADAQYCELDVVPGELNRFTLTGCLTQRTE
PLPLAFAIQDGASYAGAIVKDELQQADIRIKGSLRRQTQLGAAGSVLAQTQSAPLHDLLT
IMLKKSDNMIADTVFRTIGHERFSVPGTWRAGADAVRQILRQKAGVDLGNSIVVDGSGLS
RHNLISPETMMQVLQYIAQHDNELNYITMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQFLSGYAVPPEDQRARRVPLVRFESRLYKDIYQSN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcatcgattgttaccggacttgcctgcgcttttgttctgcatgccaatgca
gcttctgttgaggatcatcgccaatatttaccagacggcgccaatctggcgctattggta
caaaaagttggctcgacaacacccagcatggccttcaatagccagcaaatggcgcttccc
gccagtacacaaaaggtgataaccgcattagctgcattactgcaattgggtccagattat
cgattcgtcactacgatggaaagccatggccctgtcactagcggtattctgaacggtaac
ctcatcgtacggtttagcggtgatccaacactgaagcgccagcaaatacggaacatggtg
caggaattaagaaagcgcgggataaaggaaatcgccggggatgtgctgatcgacacttcg
gtattcgccagtcacgataaagccccgggctggccgtggaacgacatgacacagtgcttc
agcgcccctccgggtgccgcgattgtcgatcgtaactgcttctccgtctcactctacagt
gcgcctaaagcgggtgataatgcgtttatccgcgtcgcctcctattatccagtgcaaatg
ttcagcgaggtccgcacgctggctaaagggtcagccgatgcacaatactgcgaactggat
gtcgtgccgggggaactgaatcgctttacgcttacaggctgtttgactcaacgcacagag
ccgcttccgctggcgttcgccattcaggatggggccagctatgccggcgctattgttaaa
gatgagctacaacaggcagatatacgcatcaaaggcagtcttcgtcgtcagacgcagcta
ggagcagcggggagcgtgctggctcagacacagtctgctccactgcacgatctgctcacc
atcatgctgaaaaaatcggacaacatgattgccgatacggtttttcgcaccattggacac
gagcgatttagcgtcccgggaacgtggcgtgcaggcgcagatgcagtgcgtcagatcctt
cgtcaaaaggcaggggtagatttaggaaacagcattgttgttgatggttccggcctgtca
cgacacaacctgatctcgccagaaacgatgatgcaggtattgcagtacatcgcacagcac
gataatgaattgaattacatcaccatgcttccgctttccggctatgacggcacgctgcgt
tatcgtggtggtctgcatgaagctggcgttgatggcaaggtttcggcgaaaacaggggcg
ctgcagggggtatacaatctggcaggctttattaccacagcgagcggtcagcgtatggca
ttcgtccagttcctttcaggctatgccgtgccgccagaagaccaacgcgcacgccgtgtc
cctctggtgagatttgaaagccgtctctataaagacatttatcagagtaactaa
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