Pectobacterium aroidearum: I2D83_19740
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Entry
I2D83_19740 CDS
T07244
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pari
Pectobacterium aroidearum
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pari03000
]
I2D83_19740
Transcription factors [BR:
pari03000
]
Prokaryotic type
Other transcription factors
Others
I2D83_19740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_22
NACHT
AAA_19
MCM
AAA_14
T2SSE
BrxC_BrxD
AAA_7
AAA_30
AAA_2
ABC_tran
AAA_33
TsaE
ATPase_2
AAA_29
DUF7158
Motif
Other DBs
NCBI-ProteinID:
QPI42622
LinkDB
All DBs
Position
4436754..4438331
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AA seq
525 aa
AA seq
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MKRHVVIGVLGTTLDKRGKRENRWTKWRPTVGLCQQPDFPVDRLELLHQSRNEGMAQQVA
EDIAVVSPATQVTLQTVELRDPWNLEEVYSAFLDFASRYPFDTENEEYFIHITTGTHVVQ
ICWFLLTEARYLPAKLLQTAPGEKADRPAPQGIYAVIDLDLSRYATLTSRFQHEQERSVS
FLKSGIETRNSTFNALIDQIERVALRSTAPMLLTGPTGAGKSFLAQRIYQLRQSRHLVSG
RFVAVNCATLRGDNAMSTLFGHVKGAFTGALQARTGLLREADGGMLFLDEIAELGLDEQA
MLLKAIEEKRFLPFGSDKEVGSDFQLIAGTHRNLHEWIAQGKFREDLYARINMWTFPLPG
LAERREDIEPNLDYELQRFTRDHQTQIRFDKDARQRYLTFACSPQAAWRGNFRELGSSIA
RMATLAEQGRITVALVEEEVARLRASWRSDAPAIALPPELANIDLFEQRQLETVLDVCRT
ANSLSEAGRQLFAVSRQQKQKPNDADRLRKYLARFGLNWEGLKRV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcacgtcgtcattggtgtgctgggcaccacgttggacaaacgaggtaaacgg
gagaatcgctggacaaaatggcggcctaccgtcggcctatgccagcagccggattttccg
gtcgatcgactggagctgctgcatcagtcacgcaacgaggggatggcgcagcaggtggcg
gaggatatcgccgtggtgtcacccgctacgcaggtcacgcttcagaccgttgagttacgc
gatccgtggaatctggaagaggtctacagcgcctttctggactttgcgagccgctacccg
ttcgatactgagaacgaagagtatttcattcatatcaccacgggtactcacgtcgtgcag
atttgctggttcctactgaccgaagcccgctacctacccgccaagctgctgcaaaccgca
ccgggagagaaagcggatcgtcccgcaccgcagggcatctatgccgttatcgatctggat
ctcagccgctacgcaaccctcaccagccgctttcagcacgagcaagagcgctctgtctcg
ttcctgaaatcgggtatagaaacgcgcaacagcacgttcaacgcgctgatcgaccagatt
gaacgtgtcgcgctgcgttctaccgcgccgatgctcctgaccggcccgaccggtgcgggg
aaatcctttctggcccaacgtatctatcagttacgccagtctcgccatctggtcagtggt
cggtttgttgcggttaactgtgccacgctgcgcggcgacaatgcgatgtcgacattattc
ggccatgtgaaaggcgcatttaccggtgcattacaagcaagaacggggctcttacgtgaa
gcggacggcgggatgctgtttttggatgaaatcgctgaactcgggctggatgagcaggcg
atgttgctcaaggccattgaagaaaagcgctttttaccgtttggctcggataaagaagtc
ggcagcgatttccagttgattgccggtacgcaccgcaacctgcacgagtggattgcacag
ggtaaatttcgtgaagatctctacgcccgtatcaatatgtggacctttccactgccgggc
ttggcggaacggcgggaagacatcgaaccgaatcttgactacgaactccagcgcttcaca
cgcgatcaccaaacgcagattcgcttcgataaagacgcacggcaacgctacctcaccttt
gcctgctcaccgcaggccgcatggcgtggcaacttccgcgaactcggctcttccatcgcc
cgcatggcgacgctggcagaacaaggccgcatcaccgttgcactggtagaggaagaagtt
gcccgcctgcgagcaagctggcgaagtgatgcgccagcaatcgcgctaccgccagaactc
gccaatatcgatctgtttgaacagcgccagcttgaaaccgtgctcgacgtctgtcgtacc
gccaattcgctctccgaagccggtcgccagttattcgccgtttcacgccagcaaaaacag
aagcccaacgacgctgaccgactgcgtaagtatctggcacgttttgggctgaactgggag
gggttgaagcgggtataa
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