Pectobacterium aroidearum: I2D83_20955
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Entry
I2D83_20955 CDS
T07244
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00071
Fatty acid degradation
pari00280
Valine, leucine and isoleucine degradation
pari00310
Lysine degradation
pari00362
Benzoate degradation
pari00380
Tryptophan metabolism
pari00410
beta-Alanine metabolism
pari00640
Propanoate metabolism
pari00650
Butanoate metabolism
pari00907
Pinene, camphor and geraniol degradation
pari00930
Caprolactam degradation
pari01100
Metabolic pathways
pari01110
Biosynthesis of secondary metabolites
pari01120
Microbial metabolism in diverse environments
pari01200
Carbon metabolism
pari01212
Fatty acid metabolism
Module
pari_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I2D83_20955 (fadB)
00650 Butanoate metabolism
I2D83_20955 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I2D83_20955 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I2D83_20955 (fadB)
00310 Lysine degradation
I2D83_20955 (fadB)
00380 Tryptophan metabolism
I2D83_20955 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I2D83_20955 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I2D83_20955 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I2D83_20955 (fadB)
00930 Caprolactam degradation
I2D83_20955 (fadB)
Enzymes [BR:
pari01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I2D83_20955 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I2D83_20955 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I2D83_20955 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I2D83_20955 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QPI42839
LinkDB
All DBs
Position
4697904..4700093
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANRIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGTDSALEIIAAGKDVSAADALK
VGLVQAVVTNDKLVPAAIKMLKQAINGSLDWQAYRRPKLEALKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLIGETPVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILARIQPTLDYAGFERTNIVVEAVVENPKIKASVLAETESHVSE
NTILASNTSTIPIASLAPSLKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFREIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAIMAAGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDSKGKP
RKEQDEAVNTLLKDISQPTKAFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQQLAHLGAIYQVPDGLQQKARSNESYYPSVAPH
ADVSHGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcacggttgccagcctgggt
aaggcactggacgttctggcggaacagccgaatctgaagggcttactgctacgctctgac
aaacctgcatttattgtcggtgccgatatcacggaattcctttccctttttgccgcaccg
gccgaaaagctgcatgaatggcttgtcttcgccaaccgcatttttagccgccttgaggac
ttacccgttcccacactgtccgcgattaatagctatgcactgggaggcggttgtgaatgt
gtactggcaaccgactttcgtttagcgacgccggatgcgcgtatcggcctaccagaaacg
aagctagggatcatgccgggttttggcggcacggtcaggctgccgcgcctgctgggtaca
gatagcgcattggaaattatcgccgccggtaaagacgtcagcgcagccgatgccttaaaa
gtgggactggtgcaggccgtggtgaccaatgacaaactggttcccgctgccatcaagatg
ttgaaacaggcgattaacggctcactggactggcaggcttatcggcgcccgaaacttgaa
gcgctgaagctcaataagattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctacaaaccgccgggaagcactatccagcgcccatgttagcggtcaaaactatcgaagcc
gccgcgaccatgacgcgcgatgacgcattgcaactcgaaacgcagcacttcgttcagttg
gcgcgttccaatgaagctcgggcactcgtcggcattttcctcaatgatcagtatgttaaa
ggtaaagcgaagaagttgattggcgagacaccggtgccgcagcaagcggccgttctgggt
gcaggtattatgggcggcggaattgcctatcaatccgcgttcaaaggcgtgccgattcga
atgaaagatatcaatgagaagccgcttgcgctggggatgaatgaagctgccaagctcctg
aataaacaaatggaacgaggcaagctggatggaatgaaaatggcgacgattctggccaga
attcagccaacgctggattacgccggctttgagcgcaccaacatcgtggttgaggccgtg
gttgagaacccgaaaatcaaagccagtgtactcgccgaaactgaatcgcacgttagcgag
aatacgattctggcttcgaatacctccaccatcccgattgcttcgctggccccatcgcta
aaacggccgcaaaatttctgcggaatgcacttcttcaacccagtacaccgaatgccgctg
gtcgaaattattcgcggccctaaaaccagcgacagcaccatcgccagcgtagtggcttac
gccagcaaaatggggaaaacgccaattgtcgtgaacgactgccccgggttcttcgtgaat
cgggtgctgttcccctactttgctgcattcagcttactgctcagagacggtgccgatttc
cgcgagatcgataacgtcatggagaaaaaattcggttggccgatggggccagcttatctg
ctggatgtagtcggcattgacaccgctcaccatgctcaggccatcatggccgctggcttt
ccgcagcgtatggcgaaagattaccgtgatgcgattgatgtgctgtttgagcatcagcgc
tttgggcagaaaaacggtcagggcttctaccgctatcaaaccgatagcaaaggcaagccg
cgtaaagagcaggatgaagccgtaaacacgctccttaaagacattagccaaccgacaaaa
gcattcagtgcagaagaaattatcgctcgtatgatgatcccgatgattaatgaagtcgca
cgctgtctggaggaaggcatcgtcgccagccctgccgaagcggacatggcgctggtatac
gggctgggtttccctcccttccacggcggcgcctgccgctatctggacacattgggcagc
gaacgttatgtcgagatggcgcaacagttggcgcacctcggcgcaatctatcaggtgcca
gacggcttgcagcaaaaagccagaagcaatgaaagctattacccatcggtcgcgccacac
gcggacgtttcccacggtcaaccggcatga
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