Parasphingorhabdus cellanae: J4G78_00445
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Entry
J4G78_00445 CDS
T07111
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_00445 (addA)
Enzymes [BR:
parj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4G78_00445 (addA)
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J4G78_00445 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DUF2800
DEAD
Sf6_terminase
Motif
Other DBs
NCBI-ProteinID:
QTD56116
LinkDB
All DBs
Position
95441..98899
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AA seq
1152 aa
AA seq
DB search
MSEAPTLYPLADKQSDAVQPDDNIWLSASAGTGKTQVLTARVFRLLLRENVKPEHILCLT
FTKAGAAEMADRIHRQLASWVRADDAKLATDLSAIGAPVDPATREYARTLFARVLDARGG
GLRIMTIHSFCQTLLASFPEEAGIPALFKPIEERDQKILARQALGDLLLAEEAAGNTGII
QAIQALSVRMGEEETEKYLMKCASKADAMENLPSGVLPFVRGLLGLPTEGDAQNWLEERC
TDEAFNVASLEDMAEALAGWGTKTATAYIEQIRNWIAADPAHRAATLPDLHKIWAKVDGE
WRAVSKGLDKAAPHYHELSVAMYDECRQLLETKALFDYADLFAGALTAGRGFYHRYAQAK
KLQGVVDFDDMIRMTAKLLNQGNMAEWIRYKLDQRTDHILVDEAQDTNLAQWDIVRALAG
EFFAGLGASADKIRTLFTVGDFKQAIFGFQGTSPHNYVQARDDFFARAEASERPFKDLPL
DRSFRSTPPVLEVVDKVLEYVGEKELGLDKAIPPHQSHFAGEPGSVTLWQPVAHGAVSNA
DDEEGWLSDEKRVFAQRLALQIKEWLSLETPLWLNQKNRPLQPKDIMILVSKRDDLSALI
VARLFAENVPVAGIDRIRLNQPLVVQDLLAAIRFVLQPNDDLNLASLLVSPLLGWTQEDL
LERGYRGDAHKDKSLWQYLRTQDALVNHIEPLRTLLNMADFNTPYQFLETIVSGPMQGRK
KLTARLSHAALDPLEELLNTALAFEQDHIPTLQGFLDWFDRGDVEIKRDQIEGGNEVRLM
TVHGAKGLQAPLVILANATFDPANKKSGGFDIPDPMRPDDDLEYPVVPVRKAERTGLLDA
FATVADGRERQEHWRLLYVAMTRAEEHLVVTGILGPKAKGVVPDGSWYNAVEQGLKALGS
ELTETVRWIAQRAYTGSNVTKMPAVGAKQGKPSSNDGPIALPEWLFAPAPKEARPPRPLT
PSDLGPDDAANPPSAQIMRDAAKRGKLLHSLFERLPDIAPDKRKYVADRWLEKQKQIGDA
ARRKALIDTVVAVLDNPDWSALFSPDSFAEAPIAAVVDQHVVSGTVDRLLVTDNLITVID
FKTGRAVPKEAAQAPRAYLRQMAAYVAALEKIFPDRPVKAALLYTQGPTLLELSGDLIVQ
HKPTNKPDLDRP
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcgccgaccctttatccgcttgcggacaagcaaagtgatgctgtgcagccg
gatgataatatctggctgagcgcgtccgctgggacgggcaagacacaggtcctgaccgct
cgggttttccggctgttgctgcgcgaaaatgtgaagccggaacatatactctgcctgacc
ttcaccaaagccggcgccgccgagatggcagaccggatccaccggcaacttgctagctgg
gtgcgtgccgatgacgcgaaactggccactgatttatcggctattggggcgccggttgat
cccgcaacacgggaatatgcgcggacattattcgcccgcgtgctggatgcccgtggcggc
ggtcttcggatcatgacgatccacagcttttgtcagacgttactggctagttttcccgaa
gaagcgggtatcccggccctgttcaagccgattgaagagcgcgaccagaagatcctggcg
cgtcaggcgttaggcgatctgctgttggccgaagaggcggctgggaatactggtattatt
caagctattcaggcgcttagcgtacgaatgggcgaagaagaaaccgaaaaatacctgatg
aaatgcgcgtccaaagcggatgcgatggaaaaccttcccagcggtgtattgccgtttgtg
cggggtttgctgggtctaccgacagagggcgacgcgcaaaactggctggaagaacgatgt
accgatgaagcctttaatgtcgcgtctcttgaggacatggcggaagcgctggctggttgg
gggaccaagaccgctaccgcgtacatagagcaaattcgcaattggatagccgctgatcca
gcgcatagggctgcaacactgccagatctccacaaaatctgggcaaaagtcgatggtgag
tggcgtgctgtttcaaaaggcctggataaggccgcgccgcattatcatgagctgagcgtc
gcaatgtatgacgaatgccgccagctgcttgagaccaaggcgctgtttgactatgccgac
ctgttcgcaggtgcgctgaccgccgggcgcggtttttaccatcgctatgcacaggcaaag
aagttgcaaggcgtggtcgattttgatgatatgatccggatgaccgcgaaattgctcaat
caggggaatatggcggaatggatccgctacaaacttgaccagcgcaccgatcatatattg
gtcgacgaagcgcaggataccaatttggcgcaatgggatatcgtacgggcgctcgccggg
gagttttttgcaggattgggggcgagcgcggataaaatccggacgttgttcactgtcggc
gacttcaaacaggcgattttcggctttcagggtaccagcccgcataattacgtgcaggcc
cgtgatgattttttcgcacgggcagaggcatcagagcggccgtttaaagacctgccattg
gatcgcagtttccgttcaacaccgccagttctggaggtggtcgataaggttctggaatat
gttggcgaaaaggaactggggctggacaaggccatcccgccgcatcagagccactttgcc
ggagagcccggcagtgtaaccttgtggcaacccgttgcccatggcgcggtgagcaatgcc
gatgatgaagaaggctggcttagcgacgaaaaaagggttttcgcgcaacgacttgcgctc
cagattaaagagtggctctcgctagagacaccgctctggctgaaccagaagaaccgcccg
ctgcagcctaaagatattatgatcctggtcagcaagcgcgatgatctgagcgcactgatc
gtggcgcggctctttgctgaaaatgtaccggtagcgggcattgaccggatccgtctcaat
cagcctttggtggtacaggatttgctcgccgccatccgctttgttttacagccgaatgat
gaccttaatctcgcgtcgcttttggtgtcaccgcttttgggctggacgcaggaggatttg
ctggagcgcggctatcgcggggatgcgcacaaggataaaagcttgtggcaatatttacga
acgcaagatgcactggtgaaccatatcgaacccttgcggacattgttgaacatggcggat
ttcaacacaccctatcagtttctggaaaccattgtctctggcccgatgcaggggcgaaag
aagctgacagcgcggcttagccatgccgcgcttgatccgctggaggagttgctcaacacc
gcacttgcgtttgaacaggaccatattccgacgctgcagggctttctcgattggtttgat
cgcggcgatgttgagattaaacgtgatcagatagagggcggcaatgaggtccgcttgatg
accgtacacggagccaagggcttgcaagcgccactggttattctcgccaatgcgacattt
gaccctgcgaacaagaaaagcggtgggttcgacataccagacccgatgcgccccgatgat
gatcttgaatatccggttgtcccggtccgcaaggccgaacggaccgggttgctcgatgct
tttgcgacggtagccgatgggcgggagcggcaggaacattggcggctgctttatgtagcg
atgacgcgcgccgaggaacatctggttgtaaccggtatattgggaccgaaagcgaaaggc
gttgtaccggacggaagctggtataatgctgtcgagcagggcctgaaggcacttggcagt
gaattgacagagaccgtgcggtggattgcccagcgggcctataccggttcaaatgtgaca
aaaatgccggcggtaggagcgaaacaaggcaaaccatcttcgaatgacggaccgatagca
ctacccgaatggctatttgctccggcacccaaagaagcacgtccaccgcgtccgttaacg
ccgtcggatctcggtcccgatgatgccgctaacccgccgtcagcgcagattatgcgcgat
gctgcgaaacgtggtaagttgctgcacagcctgtttgaaagattgccggatatcgcaccg
gacaagcgcaaatatgtggcggatcgctggttggagaagcaaaagcaaataggtgatgcg
gcgcggcgcaaagcgttgatcgataccgttgtcgctgtattggacaatcccgattggtca
gcactattctcaccggacagttttgccgaagcgcctatagccgcggttgttgatcagcat
gttgtatctggcaccgtggatcgattgttggtcactgataacctgattacggttattgat
ttcaaaaccggccgcgctgtacccaaagaggcggcgcaagcgccgcgcgcatatttgcgt
caaatggcagcctatgtagcggctttggagaaaatctttcctgacaggccggttaaggcc
gctttgctttacacgcagggacctacgttgttggagctttccggcgatcttatcgtacag
cacaagccgacgaacaagccagacttggatcgcccatga
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