Parasphingorhabdus cellanae: J4G78_01520
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Entry
J4G78_01520 CDS
T07111
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parj01011
]
J4G78_01520
Enzymes [BR:
parj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J4G78_01520
Peptidoglycan biosynthesis and degradation proteins [BR:
parj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J4G78_01520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
QTD56313
LinkDB
All DBs
Position
319232..321034
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AA seq
600 aa
AA seq
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MERFAIAYKDPSVVINQFPKNVKIALTSALISLPLAPVMAQDGGAVLYKSSSVAKDIPSQ
LKRSQSEHYRAIFKAMGGNQWDMAKNLIADAPTGPLKSIAQAEYFLAANSPRAELGPLLI
LVNEAPHIPQAAQLGRLAKKRGAQLLPNLPQRRNLSYVPGLPIRKKPRAIKTNNAANAIR
GRILNFIKSDSPQSGEALLFEAENILSSEVRTELEQRIAWSYYIENDDKSAQRMAQKAQK
GSGPWVVHADWVAGLSSWRLNDCRTASAAFDNVGRRAANADLQAAGLYWGARSDIVCGQP
QKAQGKLQMAAKRSDSFYGLLSAQTLGMNIASAKSSAGFAKGDWKTLKQHDNVKAAIALV
EIGEESLADEVLRHQARIGNSSDHAALLKLSRELNLPRTQLWLAHHAPRGFKPDSQARFP
APKWKPDGGWRVDPALVYAHTLQESAFRSKAVSPANAIGLMQVRPGTAGDIARANGRKFE
KTQLFKPSTNLEYGQSYLEYLGRSSITGGKLPKVAAAYNAGPGSVQRWNNEIKDNGDPLL
YMESIPYVETRGYVSIILRNYWMYEQQAGIKSASLGTLAQNKWPVFPNKPSKSKTRFTGQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagatttgcaattgcttacaaggatcccagcgtagtgataaatcagttcccgaaa
aacgtgaaaattgctctcacctcagccttgatttctctacctctcgctccagtgatggcg
caagatggtggggctgtgttgtataaaagttcttctgtggccaaagatattccatcccaa
ctcaagcgcagtcaatcggagcattatcgcgcgattttcaaggcgatgggcggcaatcaa
tgggatatggcaaaaaatctgatcgctgatgcgccaacaggtccactcaaatccattgct
caagctgaatatttcctcgccgccaattccccccgcgccgaattggggccgttgctgata
ttggtcaatgaagcaccacatatcccgcaagcagctcaattgggacggctcgctaagaaa
cgcggtgcgcagctacttccaaacctgccgcaacggcgcaatctttcctatgtccctggc
ttgccgatccggaaaaagcctcgcgcgatcaagactaacaacgcggccaacgctattcgc
gggcggatattgaatttcattaagagtgacagcccgcaatcaggcgaggcactgcttttc
gaggcagagaatatcttgtcctctgaagtccgcacggaactagaacaaaggattgcttgg
tcttactatatcgaaaatgatgacaaatctgcccagcggatggcacagaaagcgcaaaaa
ggcagcggtccctgggttgtccatgcggattgggttgctggactgtcttcatggcgatta
aacgactgccgaaccgctagcgccgcctttgacaatgttggtcggcgtgccgccaatgct
gatttacaagctgccggactctattggggcgcgcgttcagacattgtctgcggccaaccc
cagaaagcgcaaggcaagttgcaaatggctgccaaacgcagtgacagtttttacggcctc
ctgtccgcacaaacgctgggcatgaatatcgccagtgcaaaatccagtgctggtttcgcg
aaaggtgactggaagacgctgaaacagcatgacaatgtcaaggcagctatagctctagtc
gaaattggtgaggaaagtctcgctgatgaagttttgcggcatcaggcgcgcatcgggaat
tccagcgatcatgccgcgctgttaaaattgtcgcgagaattaaacctgccccgtacacaa
ttatggctggcccatcatgcgccgcgcggattcaaaccagattcgcaagcacgcttcccc
gctccaaaatggaagccggatggaggatggcgcgttgatcctgctcttgtttatgcgcac
acacttcaggagtctgcattccgcagcaaggcagtgagtccagccaatgctatcggtctg
atgcaggttcgccctggaacagcgggcgatatcgcccgtgcaaatggtcggaaatttgaa
aagacccaattgttcaaaccatcaaccaatctggaatatggccaatcctatcttgaatat
ctcggccgctcatcgattaccggcggcaagcttccaaaggtagcggcggcatataatgct
ggtcccggctcggttcagcgctggaataacgaaatcaaggataatggcgatccattgctc
tatatggaaagcattccctatgtcgaaacgcgcggctatgtttcgatcatcttgcgcaat
tactggatgtatgaacagcaggccgggattaaatctgccagccttggaacattggcgcaa
aataaatggccggtatttcccaacaaaccgagcaaaagcaaaacacgctttaccggtcaa
taa
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