Parasphingorhabdus cellanae: J4G78_02305
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Entry
J4G78_02305 CDS
T07111
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj00300
Lysine biosynthesis
parj00470
D-Amino acid metabolism
parj01100
Metabolic pathways
parj01110
Biosynthesis of secondary metabolites
parj01120
Microbial metabolism in diverse environments
parj01230
Biosynthesis of amino acids
Module
parj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4G78_02305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4G78_02305
Enzymes [BR:
parj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J4G78_02305
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTD56455
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All DBs
Position
complement(467105..468340)
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AA seq
411 aa
AA seq
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MKKAKPIGPIPAGYASLDCELAIAGAKASVLADEHGSPLFVYSKNHLDSRIEALRDAMPG
RLHIHYAMKANPYAPVLSHMAGLVDGIDIASGGELQMALNAGAAARQISFAGPGKRDDEL
LAAIRAGITINIESPNECDRALAIGKKEGLKPRLAIRVNPDFDLKGSGMKMGGGAKQFGM
DVDLVVTTVQKILAADAHWRGFHIFAGSQALKTDAIIEAQAQTIGLAARLSEEIGLSPEH
VNLGGGFGIPYFPGDEPIDVVRIGAALQEQFSKLPEILSNTQFALELGRYLVGEAGVYLT
RIVDRKKSQGEIFLVTDGGLHHQLAASGNFGTVIRRNYPAAIATRYDQAADEVVSIVGCL
CTPLDLLSDRAEMPTAEVGDIVAIFCAGAYGATASPANFLGQGPAKEILVG
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagctaaacccattggtccaatacctgctggttatgcgagtctggattgcgag
cttgctatcgctggtgccaaagccagtgttttggcggacgaacatggttcaccgctgttc
gtttactccaaaaaccaccttgatagccggattgaggctttgcgcgacgctatgcccggg
cgattgcatattcactatgccatgaaggccaacccctatgcgccggtgctttcccacatg
gccgggcttgtcgatggtattgacattgcatccggcggcgagttgcagatggccttgaac
gctggtgcggctgctcggcagatcagctttgccgggccgggcaagcgtgatgacgagctg
cttgcagccatccgcgccggtataactatcaatatagaatctcccaacgaatgcgaccgc
gctttggcaatcggtaagaaggaagggctgaaaccccgccttgccattcgcgtaaatccc
gactttgatctcaaaggatcaggcatgaaaatgggtggcggtgccaaacaatttggcatg
gatgtcgatctcgtcgtcaccacagtgcagaaaattttggcggctgacgcccattggcgg
gggtttcatatttttgctggttcgcaggctttgaaaaccgatgcaattatcgaagcacag
gcgcaaacgatagggttagccgcacggctatcagaagaaatcggccttagtcccgagcat
gtcaatctgggtggaggttttgggataccttattttcccggggacgaaccgattgatgtt
gtacgaattggcgccgctttgcaggaacaattttcgaagttacccgagatattatcgaac
acccaatttgccctcgaactggggcgctatttggttggtgaagcgggtgtctatctgacc
cggattgtggatcgcaaaaagagccagggcgagatatttctggtcaccgatggtggtttg
caccatcaattggcggcaagcggcaatttcgggacggttattcgtcgtaactatcctgct
gcgattgcgacccgctatgaccaggctgcggacgaggtggtgtcgattgttggctgcctc
tgcacaccgctggatttgttgagcgatagagcggaaatgcccactgccgaggttggtgat
attgtcgctatattctgcgccggtgcctatggcgcaaccgctagccctgcaaatttcttg
ggacaggggccggccaaagagatattggtcggttaa
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