Parasphingorhabdus cellanae: J4G78_03475
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Entry
J4G78_03475 CDS
T07111
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4G78_03475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parj03019
]
J4G78_03475 (pnp)
03016 Transfer RNA biogenesis [BR:
parj03016
]
J4G78_03475 (pnp)
Enzymes [BR:
parj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J4G78_03475 (pnp)
Messenger RNA biogenesis [BR:
parj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J4G78_03475 (pnp)
Transfer RNA biogenesis [BR:
parj03016
]
Prokaryotic type
tRNA degradation factors
J4G78_03475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
CSD
DUF3016
Motif
Other DBs
NCBI-ProteinID:
QTD56659
LinkDB
All DBs
Position
complement(697271..699550)
Genome browser
AA seq
759 aa
AA seq
DB search
MFDVKKVEMEWGGQTLTLETGRIARQADGAVLATLGETVVLCAVTAAKSVREGQDFFPLT
VHYQEKFSAAGRIPGGFFKREGRATEKETLTSRLIDRPCRPLFPEGFYNEINVICQVMSY
DGQNEPDILAMVAASAALTISGVPFMGPIGAARVGYKEGEYQLNPSMEEVAEGELDLVVA
ATPGAVMMVESEAKELSEDVMLGAVQFAHEASKDVAGLIIDLAEQAAKEPWELASAEDNS
DIKEDLRKLVGDDIAAAYKKTDKSERSDALNAVREKAKEKYAEEEGQVQMTAGKMVKKLE
AEIVRGAIIKDGTRIDGRKLDQVRPIEAMVGLLPRTHGSSLFTRGETQAIVTTTLGTKDA
EQMIDGLDGLSYTNFMLHYNFPPYSVGEVGRFGFTSRRETGHGKLAFRALRPVLPTVEDF
PYTIRVLSDITESNGSSSMATVCGGSLAMMDAGVPLARPVSGIAMGLILEGEDFAVLSDI
LGDEDHLGDMDFKVAGTEKGITSLQMDIKVAGITQEIMKSALEQASGGRAHILGEMSKAL
SSVRTEMSEHAPRIETLQINKEKIRDVIGTGGKVIREIVAETGAKVDIDDEGLIKVSSSD
KSQIDAALAWIAGIVEEAEVGKIYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VADELSEGQEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPPRESKPRGPRRDGGGG
RGRGRDGGGGRGRGRNNDNDGGKKDGGGDIPLPSSITED
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtaaagaaagttgaaatggagtggggcggacagaccctcaccctcgaaacg
ggccgtattgcccgtcaggctgatggcgcggttctcgcgaccctcggcgaaacggttgta
ctctgtgcagtgacagccgccaaatcggtacgcgaaggacaggatttcttcccgctgacc
gtccactatcaggaaaaattctcagccgctggtcgtattccaggcggtttcttcaagcgc
gaaggccgtgcgacggaaaaagaaacgctgacatcgcgtttgattgaccgtccttgccgc
ccgctgttccccgaaggtttctacaacgaaatcaacgtgatctgtcaggtgatgagctat
gacggtcagaacgaacccgatattctggcgatggttgcggcttctgctgcgctgaccatt
tccggcgttccattcatgggccccattggtgcggctcgtgtcggttacaaagaaggcgaa
tatcagctgaacccatccatggaagaagttgccgaaggcgaactcgacctggttgtagcg
gccacacctggcgctgtgatgatggtggaatcggaagctaaagagctttccgaagacgtc
atgctcggtgctgttcagttcgcgcatgaagcatccaaggatgttgctggcctcatcatc
gatctggctgaacaggctgcgaaagagccttgggaactggcttctgccgaagataatagc
gatatcaaggaagacctgcgcaagctggttggtgacgatattgctgcggcttacaagaaa
accgacaaatcagagcgttcagacgcgctgaatgcggttcgtgaaaaagccaaagagaaa
tatgccgaagaagaaggccaggttcaaatgaccgctggcaagatggtcaagaagctggaa
gcggaaatcgttcgcggagcgatcatcaaagatggcacccgtattgatggccgtaagctg
gatcaggttcgcccgatcgaagccatggttggcttgctgccacggacccacggttcgtcc
ttgttcacccgtggtgaaacacaggcaatcgtgaccacgacgcttggcaccaaagatgcc
gagcagatgatcgatggtctggacggattgagctacaccaacttcatgctgcactataac
ttcccgccttattcggttggtgaagtagggcgttttggtttcaccagccgccgcgaaacc
ggtcatggtaagctcgctttccgcgcgctgcgtccggtattgccgacagttgaagacttc
ccgtacacgatccgggttctctccgacattaccgagtccaacggttcatcttcgatggcg
accgtttgtggcggttcattggcgatgatggatgcaggggtgcccttggcgcgtccggtt
tccggtattgcgatgggtctgatccttgaaggcgaagatttcgctgttctctccgacatt
ctcggcgacgaagatcatctcggcgacatggacttcaaggtggccggtaccgaaaaaggt
atcacctccttgcagatggacatcaaggtagccggcattacgcaggaaatcatgaagtct
gctctggaacaagccagtggcggccgtgcgcacatccttggcgaaatgagcaaagctctg
tcatcggttcgtactgaaatgtccgaacatgctccgcgtatcgaaacgctgcagatcaac
aaagagaagatccgcgacgttatcggaaccggcggtaaagtgatccgcgaaatcgttgcg
gaaaccggcgcgaaggttgatattgatgacgaaggcctgatcaaggtttcttcttctgac
aaatcccagatcgacgcggctctggcatggattgctggcattgtggaagaagccgaagtt
ggcaaaatctatgatggtaaagtcgtgaacctcgtcgactttggcgcatttgtgaacttc
atgggcggcaaagacggcctcgtccacgtctctgaaatcaagaatgagcgtgtcgagaag
gtggctgacgaactgtccgaagggcaggaagtcaaggtcaaggttctcgaaatcgatcag
cgcggcaaggttcgcctgtcgatgcgggttgttgatcaggaaaccggtgaagagctggaa
gacacacgtcctccacgcgaaagcaaaccacgcggcccgcgccgtgacggcggcggtggc
cgtggtcgcggtcgtgatggcggcggtggacgcggtcgtggtcgtaacaacgacaatgac
ggcggcaaaaaagatggcggcggcgatattccattgccaagctcgattaccgaagactag
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