Parasphingorhabdus cellanae: J4G78_03485
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Entry
J4G78_03485 CDS
T07111
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parj03016
]
J4G78_03485 (truB)
Enzymes [BR:
parj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4G78_03485 (truB)
Transfer RNA biogenesis [BR:
parj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4G78_03485 (truB)
Prokaryotic type
J4G78_03485 (truB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QTD56661
LinkDB
All DBs
Position
complement(700115..701179)
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AA seq
354 aa
AA seq
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MKPHGWIILDKPLELGSTQAVGAVKRNLREAGLLGKGKDKTKVGHGGTLDPLATGVLPIA
LGEATKLCGRMLDASKVYEFTVAFGSETETLDAEGEVTEASDHLPTLAEVEAILPQFTGP
IDQIPPQYSALKIDGKRAYDLARAGEAVEMKMRSVTIYALSVSSPLEGEDGDACERSELA
KLGEGLRESAQPDPSPTRLGQQAAKSPFPLPQGERIDSVTLIANVSKGTYIRSLARDIAR
ALGTVGHVTMLRRTKAGPFTLKHAISLDKLNEIGKGADIKDYLLPLEAGLDDIPAVDLTP
DQARLLRQGQVLDEQELIGNPPNDGLFLATEDGSPVALAELVVGTVKVVRGFNM
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccgcatggctggatcatactcgacaaaccattggagctaggctcgacacaggct
gttggcgcggtgaagcgcaacttgcgtgaggccggattgctcgggaagggcaaggataag
accaaggtcggtcatggcgggacgctggacccgttggccaccggggttttaccgatagcg
ctgggtgaggcgacaaagctgtgcgggcggatgctggatgcgtcgaaagtctacgagttt
acggtggcttttgggagcgagaccgagacgctggacgcggaaggggaggtgaccgaggct
tccgatcatttgccgacactggcggaggtcgaggccatattgccgcaatttaccgggccg
attgatcagataccgccacaatattccgctctgaaaattgatggcaagcgcgcttatgat
ctggcgcgggccggtgaagcggttgagatgaagatgcggagtgtgacgatatatgctctc
tccgtttcctctccccttgagggagaggacggcgatgcttgtgagcggagcgaactagct
aagcttggtgaggggttgagagagagcgcccagccagacccctctccaactcgactaggg
cagcaagctgccaagtctccgtttcctctccctcaaggggagaggatagattctgttacc
ctcatcgccaatgtgtccaaaggcacctatatccgctctctggcccgggatatcgcgcgc
gcactcggtaccgtcggccatgtcacgatgctgcgccgcaccaaggcggggccgtttacg
ctgaaacatgcgatttcgctggacaaactcaatgaaattggtaagggcgcggacattaaa
gattatctcttgccacttgaggcagggctggacgacatcccggctgttgacctcactcct
gatcaggcaagactgcttcggcaaggccaagtgctggacgaacaggaattgatcgggaac
ccgccaaatgacgggctttttctagcgaccgaagatggttctccggttgccttggcagag
cttgttgttggaaccgtaaaggttgttcgcggatttaatatgtaa
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