Parasphingorhabdus cellanae: J4G78_06040
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Entry
J4G78_06040 CDS
T07111
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_06040 (radA)
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J4G78_06040 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA
AAA_22
RecA
AAA_16
NTPase_1
AAA_5
nSTAND3
AAA_30
MeaB
DUF7125
DUF5919
SLFN-g3_helicase
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QTD57109
LinkDB
All DBs
Position
complement(1219617..1220981)
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AA seq
454 aa
AA seq
DB search
MAKPKKKYVCQNCGSISHRWEGQCADCGEWNTLVEEAGDTIFAAKHNLQSGGREVRLVGL
DSEIQLPERKKTGIEEFDRAVGGGLVAGSATLMGGDPGIGKSTLLLQVSARLADAGCSVA
YISGEEAADQVRLRARRLGLGKAPVKLASATSVRDILTTLGKDAPDFVVIDSIQTMHSDL
IEGAPGTVSQVRASSQELIKFAKEHGTMIMLVGHVTKDGNIAGPRVLEHMVDTVMSFEGE
RSHQYRILRSIKNRFGGTDEIGVFAMEEMGLSEVQNPSALFLTDRSEEVTGATVFPALEG
TRPVLVEIQALTVRLASGATPRRSVVGWDSSRLAMILAVLEARCGLSFSGAEVYLNVAGG
YRLTDPAADLAVAAALISAHAEKPMPSDAVIFGEIALSGEIRPVSNTALRLKEASKLGFG
RALIPASKEPAPTGVNTVNFGTLANLVDHMLSRD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccgaagaaaaaatatgtctgccaaaattgtggatctatctcgcatcgctgg
gaggggcaatgcgcagattgtggcgagtggaatacgctggttgaagaggcgggcgacact
atattcgcggctaagcacaatttgcagagtggcggccgggaagttcggctggtcgggctg
gattcggaaatccaactgccagagcgcaagaagacagggatagaagaatttgatcgcgcg
gttggcggtggacttgtcgccggttcggcaacgctgatgggtggcgatccgggaatcggg
aaatcgacgcttttgcttcaggtttctgcacggctcgctgatgcggggtgctcagtggcc
tatatttccggtgaagaagccgcagatcaagtgcgcttgcgggctcgccggctgggtctg
ggtaaggcgccagtcaaattggcctcggctacatcggttcgtgatatactgacgacgcta
ggcaaagatgcgccggattttgttgtgattgattcgatccagaccatgcatagcgacctt
atcgaaggggctcccggaacggttagtcaggtgcgcgcatcgtcgcaggaactcataaaa
tttgccaaagaacatggcacgatgatcatgttggtcggtcatgtgaccaaagacggtaat
atcgccgggccacgcgtgttggaacatatggtcgacacggtgatgagctttgagggcgag
cgtagccatcaatatcggatattaagatcaataaagaaccgctttggcgggaccgatgaa
atcggcgtttttgctatggaagaaatgggactcagcgaggttcaaaatccttccgcgctg
tttcttactgaccgcagtgaagaggtaactggtgcgactgtttttcctgcgcttgaagga
acccgcccggtattggttgaaatacaggctttgactgttcggctggcaagtggagcaacc
ccgcgccgctcggttgttggttgggacagctctcgtctagcgatgatattggctgtgttg
gaagcacgatgcgggctgagtttctctggggcagaagtatatttgaatgtggctggtggt
tatcggctgaccgatccagcggctgatttggcggtggcggcggccttgatttccgcccat
gctgaaaaaccgatgccaagcgatgctgtgatttttggtgaaatagcgctttctggtgag
attcgtcccgtgtccaacacggcgctccggcttaaagaagcctcgaaacttggctttggc
cgggcgctcattccagcctcaaaagaacctgctccgacgggtgtgaatactgtgaacttt
gggacgcttgccaatctcgttgaccatatgcttagccgcgattag
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