KEGG   Parasphingorhabdus cellanae: J4G78_06645
Entry
J4G78_06645       CDS       T07111                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
parj  Parasphingorhabdus cellanae
Pathway
parj03030  DNA replication
parj03410  Base excision repair
parj03420  Nucleotide excision repair
parj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:parj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J4G78_06645 (polA)
   03410 Base excision repair
    J4G78_06645 (polA)
   03420 Nucleotide excision repair
    J4G78_06645 (polA)
   03440 Homologous recombination
    J4G78_06645 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:parj03032]
    J4G78_06645 (polA)
   03400 DNA repair and recombination proteins [BR:parj03400]
    J4G78_06645 (polA)
Enzymes [BR:parj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J4G78_06645 (polA)
DNA replication proteins [BR:parj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     J4G78_06645 (polA)
DNA repair and recombination proteins [BR:parj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     J4G78_06645 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J4G78_06645 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DprA_N HHH_2 HHH CEP170_C
Other DBs
NCBI-ProteinID: QTD57217
LinkDB
Position
complement(1350079..1352904)
AA seq 941 aa
MTDADSSSTDSTKQKHLYLVDGSAYIFRAYHRLPPLTNIHGEPVGAVYGYTTMLWKLADE
LHKSDGPTHMAVVLDKSSQSFRNELYSEYKAHRPEPPEDLRPQFPMIRDATRAFSLPLIE
EENVEADDMIASYTKAAVAEGWKVTIVSSDKDLMQLIEPSDDSRVDMLDTMKNVRMGKAT
VEEKFGVGPEKLGDVLGLMGDSADNIPGVPGIGPKTASKLINEYGDIEAVLAAAPDMKKS
KMKENILENIEQARLSRVLVTLKEDCPLPDTLDSFLIKDIPDAPLREFLTHHGFNSLLKK
LGGGQAEPQNPDVDGSIGDSAPPAAAKPVEAPAIDRSTYECVQDLETLDIWIDRARTRGV
MAVDVETDSLESVTARVVGVCMATGPNEACYIPLGHGSGDMFAESPKQIATDEALARLKP
LLEDDAVLKVGQNLKYDMTVLAQHDIQITPFDDTLVMSFNLDAGLHGHGMDELSKLHLGH
ECISFKSLTGTGKKAITFAEVPLDKATEYAAEDADVTLRLWEILRLRMAPEQATRVYQMV
DRPLVPVIAKMEETGVLVDREELARLSRSFAENMESLEKEIHALAGETFSIGSPKQLGEI
LFGKLGLKGGKKGKSGQYSTDVTVLERLAGDGEPIAQKVVDWRQLSKLKSTYTDALQEQI
NAKTGRVHTSYSLSGAQTGRLSSTEPNLQNIPIRTEIGRQIRQAFVAAPGNVILAADYSQ
IELRLAAHIADVKTLKEAFAAGEDIHNRTAQELFATVDRDTRGRAKTINFAILYGISRWG
LAKRLEVDADEAQAMIDTYFERFPGINRYISETLQAARESGYTETLFGRKTWFERLKSAN
QTERQGSERAAINAPIQGTSADIIKRAMARMLPALAEAKLPAVKMLMQVHDELVFELPES
DVAAASDVIRTVMSGAAEPAVKLSVPLDVDIGTGKSWDEAH
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgacagatgcagattcttccagcacggattcgacgaaacaaaaacatctctatctggtt
gatggttcggcctatattttccgggcctatcaccggctgccgccgctcaccaatattcat
ggcgaaccggtcggagcggtttacggatataccaccatgttgtggaagctggcggatgag
ctgcacaaatcggatggcccgacccatatggcggtggtgctcgacaagtcatcgcaaagc
ttccgcaacgaactttatagcgaatataaggcccatcgccccgagcctccggaggacctg
cgcccgcaattcccgatgatccgcgatgcgacccgcgctttttcgctgccgctgatcgag
gaagaaaatgtcgaggccgacgacatgatcgccagctataccaaggcagcggtcgccgaa
ggctggaaggtcacgattgtctcgtccgacaaggatctgatgcagctgatcgagccatcg
gacgacagccgcgtcgatatgctcgacacgatgaaaaatgtccgcatgggcaaagcgacg
gtggaggaaaaattcggcgttggtccggaaaagctgggcgatgtgctcggcctgatgggc
gacagcgcggataatattcccggcgtccccggcattggtccgaaaaccgcgtccaaattg
atcaacgaatatggcgatatcgaagcggtgctcgccgccgcgccggacatgaaaaagtcc
aagatgaaggaaaatattctcgagaatatcgaacaggcccgcctttctcgcgtgctggtg
acgctgaaagaggactgtcccttgcccgatacgctcgacagtttcctgatcaaggatatt
ccagatgccccgctgcgggaatttctgacccatcacgggtttaactcgctgctgaagaag
ctcggcggtggtcaagccgagccgcaaaatcccgatgtcgatggcagcatcggcgatagc
gcgccgcccgccgcggccaagccggtggaagcgccagcgattgatcgcagcacctatgaa
tgtgtgcaggatctggagacgctcgacatatggattgatcgcgcgcgcaccaggggcgtg
atggcggtcgatgttgaaacggacagtctggaaagcgtcaccgcgcgggttgtcggtgtc
tgcatggcgaccgggccaaacgaggcctgctacatcccgctgggccatggcagcggcgac
atgtttgcagaatcgcccaagcagattgcgaccgacgaggcgctggcgcggctgaaaccg
ctgctggaagacgacgcggtgctgaaggtcgggcagaacctgaaatatgacatgaccgtg
ctggcccagcatgacattcagatcaccccgtttgacgacacgttggtgatgagcttcaac
ctcgacgcgggtctgcatggccacgggatggatgaactcagcaagctgcatttgggccac
gagtgtatcagcttcaaatcgctgaccggcacgggcaagaaagcgatcaccttcgccgaa
gtcccgctcgataaagcgaccgaatatgccgccgaggatgccgatgtcaccctgcgcctg
tgggagattttgcgcctgcgtatggccccggaacaggcgacgcgcgtctatcagatggtc
gaccggccgctggtcccggtgatcgcgaaaatggaagaaaccggcgtgctggtcgaccgc
gaagaactggcgcggctgtcgcgaagctttgccgagaatatggaaagccttgagaaggaa
attcacgcgctggcgggcgagactttttccattggcagccccaagcaactgggcgaaatc
ctgttcggcaagctgggcctgaaaggcggcaaaaagggcaagagcgggcaatattccacc
gatgtcacagtgctcgaacggctggccggcgatggcgagccgattgcgcaaaaggttgtc
gactggcggcaattgtcgaagctcaaatccacctataccgatgcgctgcaggaacagatt
aacgccaagaccggccgcgtgcatacgtcctatagccttagcggcgcgcagaccgggcga
ctgtcatcgaccgagccgaaccttcagaatatcccgatccgcaccgaaatcggccggcaa
atccggcaagcctttgtcgccgcgcccggcaatgttattctcgcggccgactatagccag
attgaactgcgcctcgccgcgcatattgcggacgttaaaaccctgaaagaggcgttcgcg
gcgggtgaggatattcataaccgcacggcacaggaactcttcgccacggttgatcgcgat
acgcgcgggcgggccaagacgatcaacttcgcgatcctctatggcatctcgcgctggggc
ctcgccaagcggctggaggtcgacgcggatgaagcgcaggcgatgatcgacacttatttc
gaacgcttccccggcatcaaccgctatatttccgaaaccctgcaagcggcgcgggaaagc
ggttatacggagactttattcggccgcaaaacgtggttcgagcgcctgaaatccgccaac
cagaccgagcgccagggcagcgaacgcgccgcgatcaacgccccgatacagggcaccagc
gccgacatcatcaaacgcgccatggcccgcatgctccccgcgctggccgaggccaagcta
ccagcggtcaagatgctgatgcaggtccacgacgaactggtcttcgaactgcccgaaagc
gacgtcgcggcggcgtccgatgtgatccgcacggtcatgtccggtgcggcagagccagcg
gtgaaactatcggtgccgctggatgtcgatatcgggaccggcaagagttgggacgaggcg
cattag

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