Parasphingorhabdus cellanae: J4G78_06680
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Entry
J4G78_06680 CDS
T07111
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parj03009
]
J4G78_06680 (rimO)
Enzymes [BR:
parj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J4G78_06680 (rimO)
Ribosome biogenesis [BR:
parj03009
]
Prokaryotic type
ribosomal protein modification factors
J4G78_06680 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QTD57223
LinkDB
All DBs
Position
complement(1357655..1359022)
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AA seq
455 aa
AA seq
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MATAIPSPPKVGMVSLGCPKALVDSERILTQLRSDGYQMSPDYSGADVVLVNTCGFLDSA
KEESLEAIGEAMAENGRVIVTGCMGNEADTIMERFPEVLAVTGAHQYEDVVTAVHAAAPA
ARGAFVDLVPDAGLKLTPRHYSYLKISEGCNHRCSFCIIPSLRGDLVSRRPDAILREAEK
LVANGTKELLVISQDTSAYGVDIRHQPQIWNGPIGQGREVRAHMTDLAVALGELGVWTRL
HYVYPYPHVDKVIPLMAEGKITPYLDIPFQHAAPNVLKRMKRPANEAKVLQRVKNWRDIC
PDLTIRSTFVVGFPGETEEDFQYLLDWLEEAQLDRVGGFRFEPVEGAAANALDGAVPEEV
KEERYQRLMEKTAAISAARLQAKVGRTLPVIIDEIGAPDEDGDIGATARSQADAPEIDGN
VFLRNISADVAVGDIIDAEIEDADAHDLFGAPVTV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcaatcccttctccgcccaaagtcggcatggtgtcccttggctgtcccaag
gcgctggtcgacagtgaacgcattttgacgcagcttcgctctgacggttatcagatgtcg
ccagactattccggcgcggatgtcgtgctggtcaatacctgcgggtttctcgacagtgcg
aaggaagagtcgctcgaagctattggcgaggcaatggcggaaaatggccgcgtgatcgtc
accggctgcatgggcaatgaagccgacacgatcatggaacgtttccccgaagtcttggcc
gtcaccggcgcgcatcaatatgaagatgtcgtcacggcggtccatgcggcggccccggcg
gcgcgcggggcttttgtggacctggtccccgatgccggcctgaaactgacaccgcgccat
tatagctatttgaagatttccgaaggctgcaaccatcgctgttccttctgtatcatcccg
tccttgcgcggcgatcttgtgtcacggcgacccgatgcgatcctgcgtgaagcggaaaag
ctcgtcgccaatggcaccaaggaattgctggtcatcagccaggacacctcggcctacggc
gtcgatatccgccatcagccgcagatctggaatggtccgatcgggcagggccgtgaagtg
cgggcgcatatgaccgatctggcggtggcgctcggcgaactcggcgtgtggacgcggctg
cactatgtctatccctatccgcatgtcgacaaggtcatcccgctgatggccgagggcaag
atcacgccctatctcgacatcccgttccagcatgccgcgcccaatgtgctgaaacgcatg
aagcggccagccaatgaagcgaaagtgctgcaacgggtgaagaactggcgcgatatctgc
cccgatctcaccatccgctccacctttgtcgtaggcttcccgggagagacggaagaggat
ttccaatatctgctcgactggctggaagaagcgcagctcgaccgggttggcggcttccgc
tttgaacccgtggaaggcgcagcggccaatgcgctagacggcgcggtgccggaagaggtt
aaggaagagcgctatcagcgcctgatggaaaaaaccgccgcgatcagcgccgcgagactg
caagccaaggtcggccgcacgctacccgtcatcatcgatgaaattggcgcaccggacgaa
gatggcgacatcggcgcaaccgcgcggtcacaagccgatgcgccagagatcgacggcaat
gtgttcctgcgcaatatcagcgcggacgtcgcggttggcgatattattgatgccgagatc
gaagatgccgacgcccacgatctgttcggagcgccggtcaccgtttga
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