Parasphingorhabdus cellanae: J4G78_06905
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Entry
J4G78_06905 CDS
T07111
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj03410
Base excision repair
parj03430
Mismatch repair
parj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4G78_06905 (recJ)
03430 Mismatch repair
J4G78_06905 (recJ)
03440 Homologous recombination
J4G78_06905 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_06905 (recJ)
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J4G78_06905 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J4G78_06905 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J4G78_06905 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QTD57258
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Position
1401116..1402882
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AA seq
588 aa
AA seq
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MNAVLNVTQSLSGQSWQWRSTSADARDPGFQPDDLVTQLLLARGATRETLDINKDPTIRG
FMPDPSVFQDMDVAAERLSKAVLNSDKITVFGDYDVDGATSAALLIRLLRDLGLEAGYYI
PDRLMEGYGPSGEALVKLGQQGSDLVVTVDCGAMAFEALDMAHKAGVEVIVVDHHKCAAE
LPKASAMVNPNRLDESDAGAEHGHLAAVGIAFLLGAALVRNLRGKGFFKDRPEPKLLELL
DIVALGTVADVAQLRGLNRAFVAQGLKVLAGRKNIGLSALIDASRLKRAPICSDLGFALG
PRINAGGRVGKSDLGVRLLTTQNPEEAQKISAELNHYNEERRAIEAHVLEEAEAMCSSQQ
NQAVVVLSAKGWHPGVIGIVAGRIKEKLGRPAIIIAEDEDGIGKGSGRSISGVDLGAAII
AAKDQGLLIAGGGHAMAAGVTIDATKVDAFSEFLNDRLADTVGTAQAGKALLLDAVLSPK
GVNPLFVEAMDGAGPYGMGWPAPRIAAGPVRIIKCDIVGKDHVRMIVAGDDGGSIKTIAF
RAAESDLGQALLSAPKNRKLWIAGRAKIDDWGSRPAAEIHLEDAAWAD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagttctcaatgtcacgcaatcgctatcgggtcaaagttggcaatggcgcagc
accagcgccgacgcacgcgaccccggttttcagcccgatgatctggtcacgcaattattg
ctggcccgcggcgcgacccgtgaaacactggatataaacaaggatccgacgatcagaggg
tttatgccggatccgtcagtttttcaggacatggacgtggccgccgagcgactgtcaaaa
gccgtcctgaatagtgacaaaataacggtttttggtgactatgatgttgatggtgcgacc
agtgccgcgctccttatccgattgctccgcgacctcggactggaggcgggctattatatt
cccgatcgcttgatggaaggctatggtccgtccggagaagcgctggtcaagctcggtcag
caaggctctgatcttgtcgtgacagtggactgcggtgcaatggcctttgaagcgcttgat
atggcgcataaagccggcgtcgaagtcatcgtcgtcgatcaccataaatgcgccgccgag
ctgcccaaagccagcgccatggtcaatcccaatcgcctcgatgagagcgatgccggagcc
gagcatgggcatctggccgccgttgggatcgcctttctgttaggggcagccttggttcgt
aatttgcgtggcaagggctttttcaaagaccggcccgaaccgaaattactcgaactgctc
gacattgtcgcgctgggaaccgttgccgatgtcgcccaacttcgcggcctcaaccgcgcc
tttgtcgcgcaaggactgaaagtgcttgcaggtcgcaaaaacatcggcctctccgccttg
atcgacgccagtcgtttgaaacgcgcgccgatatgctcagatctcggctttgccttggga
ccaaggatcaatgctggcggccgcgttggtaaatccgaccttggcgtccgcttgctgacg
acccaaaaccccgaagaagcacagaaaatatccgcagaactgaatcattataatgaggaa
cgccgggcgattgaggcgcatgtactggaagaagccgaggccatgtgttcctcccaacag
aatcaggccgttgtggtcctgtcagccaaaggctggcatccgggcgtgatcgggatcgtt
gccggccgcatcaaggaaaaattgggccgcccagccatcatcattgccgaagacgaagac
ggcattggaaaagggtcgggccgctccatttctggcgtagatctcggcgcagccataatc
gcagcgaaagaccagggcttgctgatcgctggcggggggcacgccatggcggccggcgtt
accatcgacgccaccaaagttgatgcatttagcgaatttctcaatgaccggctggctgac
actgtcggcacagcgcaagccggaaaggctttgctgcttgacgctgttctctcccccaaa
ggggtcaatccgctgtttgtagaagccatggacggcgcgggcccctacggtatgggctgg
ccggcaccgcgcattgccgccgggcccgtgcggatcatcaaatgcgacattgtcggcaag
gaccatgtccggatgattgtcgcaggcgatgatggcggttccatcaagactatcgcgttc
agagcagccgaaagcgatttgggtcaagctctgctcagtgctccaaagaaccggaagtta
tggatcgccggccgcgccaagatcgacgattggggcagccgccccgccgccgaaatccat
ctggaagacgccgcctgggccgattaa
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