Parasphingorhabdus cellanae: J4G78_07650
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Entry
J4G78_07650 CDS
T07111
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parj03032
]
J4G78_07650
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_07650
Enzymes [BR:
parj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J4G78_07650
DNA replication proteins [BR:
parj03032
]
Prokaryotic type
DNA Topoisomerases
J4G78_07650
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J4G78_07650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
QTD57390
LinkDB
All DBs
Position
complement(1560202..1561230)
Genome browser
AA seq
342 aa
AA seq
DB search
MQTAIANNLIYVSDTMPGIVRQPVENDFQYIDPKQNPIKDMRIISRINALSIPPAYQQVW
ICPLDNGHIQATGVDEAGRKQYRYHPDWREYRDRQKFSQLVDFAHGLPKLRRDIRRIFRA
ANPDQTIGKELACAALVRLLDNVPLRIGNKQNDKARGATTLVAKNIRMNENELRLDYIAK
GGKRVRRQIKDRRLLQILSSIDDLPGKALFQYFGRDGEIYPLDSGDVNQWLKDQSGNADI
SAKVFRTWHGSVAAFRYVRLAKNPTIKAACEKAADRLKNTPAICRSSYIHPAIIALTRKS
QSEREALAKLSGPSTSDLRKDEKILLRFLEETDWPQETSCSR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgccatcgcgaataatctcatctatgtatcggacactatgccgggcattgtc
aggcaacccgttgaaaatgattttcaatatattgatcctaagcaaaatccgatcaaagat
atgcgaataattagccggattaatgcgctttccattcccccggcttaccagcaagtctgg
atatgcccacttgataatggccatatccaagccaccggtgttgatgaagctggacgcaaa
caatatcgatatcatcctgattggcgagaatatcgtgatcgccagaaattttcacagctt
gtagattttgcacatgggctgcctaaattgcgccgcgacatccgccgtatttttagggct
gcaaatcccgatcaaactatcggcaaagagctcgcttgcgcggctctggtgcgtctgttg
gataatgttcctttgaggattggcaataaacaaaatgataaagcacgcggagcgacaacg
ctggttgccaagaatattcggatgaacgaaaatgagctacggttggactatatcgcaaaa
ggtggcaaacgcgtccggcgacaaataaaggaccggcgtttgctccagatattatcatcg
atagatgatttgccaggcaaggcgctattccaatatttcggccgagatggtgagatatac
ccgctggattcaggagatgtgaatcaatggcttaaggatcagtcaggcaatgcagatatt
agcgcgaaagtctttcgaacttggcatggaagcgtcgccgcgtttcgctatgtgaggttg
gcaaaaaacccgactatcaaagccgcttgtgaaaaagccgctgatcgcctgaaaaacact
ccagccatttgtcgatcaagctatattcatccggcgatcatagcactcacaagaaagagt
caatctgaacgcgaagctttggcgaagctttcagggccgtccacaagcgacctgagaaaa
gacgaaaaaatattgctgcggtttctcgaagaaactgattggccgcaggaaacttcctgc
agtcgttaa
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