KEGG   Parasphingorhabdus cellanae: J4G78_10945
Entry
J4G78_10945       CDS       T07111                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
parj  Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:parj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parj03400]
    J4G78_10945
Enzymes [BR:parj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J4G78_10945
    5.6.2.6  RNA 3'-5' helicase
     J4G78_10945
DNA repair and recombination proteins [BR:parj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J4G78_10945
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: QTD54772
UniProt: A0ABX7T1W6
LinkDB
Position
complement(2294269..2296704)
AA seq 811 aa
MSGKALPKPLSDWFAARGWTVRRHQMEMLQAAGAGRHALLTAPTGAGKTLAGFLPTLADL
IEQPDFDGLHTLYISPLKALAVDVQRNLLTPIDEMELPIKVETRSGDTPANRKARQRVKP
PQILLTTPESLNLLLSQEDSFTLFAKLKHVIIDEVHAFASGKRGDLLSLSLARLQQIAPD
MRRAALSATVADPDDFRAWLAPYGDIDTVTHVLGEEGAPADIAIMIPETPDGDKIRVPWA
GHAGVYAIPQVMEQIKANRMTLVFTNTRFLAEFIFQKLWEINEDTLPIGVHHGSLSKEAR
RKVENAMATGKMRALVCTASLDLGVDWGDIDCVIQMGAPKGSSRLLQRIGRANHRLDVSS
KALLVPGNRFEYLEAQAALDAVNEGKRDGEPFRPGGLDVLAQHVMTCACAAPFQEDDLLD
ELQSSLPYSALDKDTFDRVLGFTRDGGYALKAYDKFKRLRRDGKGVWHLVHPRFATQHRL
NAGIIVDAAMMNVRFKNGRNLGKVEESFAAILSPGDTFFFAGMSLELVKLDASDVIVRAT
KKAAMIPSYMGLRLPLTTHLSDRVRGFLTDRAGWARFPDDVREWLEMQDHRSRLPEPGEL
LVETFPHKGLHYMTAYSFEGWNAHQSLGMLLTRRMETRGLKPIGFVANDYALACWSMEPV
TDPVPLFSADILEEEFFDWIEGSYLLKRAFREVAVISGLVDRQHPGKRKTGKQVTFSTDL
IFDVLRKYEPDHLLMQAAWADARARMTDVARLGDLLDRAAGSMVHVELDRVSPLSVPVLV
MIGREHVAQGATDDALLIEAEGLIEEAMRGD
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagtggcaaagcccttcccaaacctctctccgattggttcgccgcgcgcggatggact
gtgcggcggcatcaaatggaaatgttgcaagcggccggggcagggcggcatgccttgctg
accgctccgacaggtgcaggcaaaacgttggcggggttcttaccgacgctcgctgacctc
atagaacagcctgattttgacggcctccacacgctttatatttctccgctcaaagccttg
gcggtcgatgtgcagcgcaacctgctgacgccgattgacgaaatggagctgccgatcaag
gtcgaaacccgcagcggcgatacgcccgccaatcgcaaggcgcgccagcgagttaaaccg
ccgcagatattactgacaacgccagagtcgctcaacctgctgctcagtcaggaagacagt
ttcacgctctttgccaagctcaagcatgtgatcatcgacgaggtgcatgcctttgcatcc
gggaagcgtggcgatttgctttcgctgtctctcgcacggctgcaacaaatagcacccgat
atgcgccgcgccgccttatccgctacggtcgccgatcctgatgattttcgcgcctggctg
gcaccctatggcgatatcgataccgtaacccatgtgctcggcgaagagggcgcgcccgcc
gatattgcgatcatgatccccgaaaccccggacggcgacaagatccgtgtgccctgggcc
gggcatgccggcgtctatgccattccgcaggtgatggagcagatcaaggccaaccggatg
acgctggttttcaccaatacgcgctttctcgcggagtttatcttccagaaactgtgggaa
attaacgaggacactctgccgatcggcgtgcatcatggcagcttgtcgaaagaggcacgg
cgcaaggttgagaacgccatggcaacgggcaagatgcgcgctttggtctgcacggcttcg
ctcgatcttggggtcgattggggcgacattgattgcgtgatccagatgggtgcacccaaa
ggaagctcccggttgctgcaacgcataggccgcgccaatcaccggctcgatgtttcgtcc
aaggcgctgctggtgcctggcaaccgctttgaatatctggaagcgcaggcggcattggat
gcggttaatgaaggcaagcgtgacggtgagccgtttcgcccgggcgggctcgatgtgctg
gcgcaacatgtcatgacctgcgcgtgtgcagccccgtttcaggaagatgatttgcttgat
gagctgcaatcctcgctgccctatagcgcgctcgacaaagacacgtttgaccgtgtgctg
ggcttcactcgagacggcggctatgcgctgaaagcctatgacaagttcaaacggctgcgg
cgcgatggcaagggcgtatggcatcttgttcatccgcgctttgcgactcagcatcgtcta
aatgccggaattatcgttgatgctgcgatgatgaatgtgcggttcaaaaatggccgcaat
ctcggtaaggtggaggaaagcttcgccgcgatcctcagccccggcgacaccttttttttc
gcgggcatgagcctggaactggtcaagctggacgcgtccgatgtcattgtccgcgccacc
aaaaaagcggcgatgatccccagctatatggggctacgtctgcctttgaccactcatttg
tcagatcgggtgcggggcttcttgaccgaccgggcagggtgggcgcgcttcccagacgat
gtgcgcgaatggttggaaatgcaggaccatcgctcgcgtttgccagaacctggcgaactg
ctggtggagacattcccgcacaaggggctgcattacatgacggcctatagctttgaaggc
tggaacgcgcaccaatcactcggcatgttgctaacgcggcggatggagacgcggggactg
aaaccaatcggctttgtcgccaatgattatgcgctcgcctgctggagcatggagccagtg
actgaccccgtgccgctgttcagtgcggatatactggaggaggaatttttcgactggatc
gaagggtcctatctgctcaaacgcgcttttcgcgaagtggccgtgatcagcggtctcgtc
gaccggcaacaccccggcaaacgcaaaaccggcaagcaggtgaccttttcaaccgatctg
attttcgatgtgctgcgcaaatatgaaccggaccatctattgatgcaggcggcttgggcc
gatgcgcgagcacggatgaccgatgtcgcgcggctgggcgatttgcttgaccgggcagcc
ggttccatggtgcatgttgagctcgaccgcgtgagcccgctctccgttccggtgctggtg
atgatcggccgcgaacatgtggctcagggtgccaccgatgacgcattgttgattgaggcg
gaaggcctgatcgaagaggccatgcgcggcgactag

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