Parasphingorhabdus cellanae: J4G78_11060
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Entry
J4G78_11060 CDS
T07111
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parj03016
]
J4G78_11060
Enzymes [BR:
parj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J4G78_11060
Transfer RNA biogenesis [BR:
parj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J4G78_11060
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTD54793
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All DBs
Position
2312791..2313408
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AA seq
205 aa
AA seq
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MAVFFHEEDLPEGVLGTGAVAVDTETMGLQTLRDRLCLLQISDGNGDEHLVRFNPDSDYS
APNLKRILADPNRIKLYHFARFDLAAIEYYMGVMAEPVFCTKIASRLIRTYTDRHGLKEL
VRELLGQDISKQQQSSDWGGPELSDAQRDYAASDVRFLHRLKDELEIRLEREGRTAMAQA
CFDFLPHRARLDIAGWPETDIFAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatttttccacgaagaagatttgcccgaaggcgtattaggcaccggagcggtt
gccgttgataccgagactatgggcctccaaacattgcgcgaccggctttgcttattgcaa
atatcagatggcaatggtgatgagcatcttgttcgtttcaatcctgatagcgactatagc
gcccctaatttgaagcggatattggccgatccgaaccggataaaattatatcatttcgct
cgtttcgatctggcggcgatagaatattatatgggcgtgatggctgaaccggttttctgc
acgaaaatcgcatcccggctaatccgtacatatactgaccggcatggtttgaaagagctg
gtcagggaattgcttggtcaggatatatccaaacaacaacaatccagcgattggggcggt
cctgaattgagtgatgcacagcgcgattatgcggcatccgatgttcgtttccttcaccgg
ctgaaggatgaactcgaaatccggttggagagagaagggcggacggcaatggctcaggcc
tgctttgactttttaccgcaccgggcgcgtcttgatatcgcgggttggcccgaaacagat
atatttgcccatgcttga
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