Parasphingorhabdus cellanae: J4G78_13690
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Entry
J4G78_13690 CDS
T07111
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj00300
Lysine biosynthesis
parj00470
D-Amino acid metabolism
parj01100
Metabolic pathways
parj01110
Biosynthesis of secondary metabolites
parj01120
Microbial metabolism in diverse environments
parj01230
Biosynthesis of amino acids
Module
parj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4G78_13690 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4G78_13690 (lysA)
Enzymes [BR:
parj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J4G78_13690 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTD55263
UniProt:
A0ABX7T2S6
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Position
complement(2843523..2844782)
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AA seq
419 aa
AA seq
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MDHFQLKDGVLHAENVALPAIAEQVGTPVYVYSRATLERHARVFREGLKDAGKIHLAFAV
KSNPNLAVLKILANQGYGADVVSGGELERALAAGMKAEDIVFSGVGKSSAELMLGLDKGI
GQFNLESEEEGQMLAEIAAARGEQAPATLRVNPDVDAGTHAKISTGKAENKFGVAIDVAP
DIFARLSKLDGLNLRGVAVHIGSQLQKLDPLEKCYTRMGQLVSDLRAAGHTITHVDLGGG
LGVPYKPEESPPSPADYGAMIARVTQGWDVTLMFEPGRVIAGNSGVMMTQVIRIKPGVNS
DFVIVDAAMNDLMRPAIYDAWHHFEAVRPTGETMTASIVGPICESSDIFAKERDVDRVQT
DDFGIFRTAGAYGATMANTYNSRPLVPEVLVDGNKFAVVAERIEPATIMAAEHVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttcaacttaaagatggcgtgctgcatgccgaaaacgttgcactgcccgcc
attgcggagcaggtcggcacaccggtctatgtctattcccgcgccacgctggagcgtcat
gcccgcgtattccgtgaaggtctgaaagatgcgggcaaaatccatctcgcctttgcggta
aagtccaaccccaatctcgccgtgctgaaaattctcgccaatcaaggctatggcgcagat
gtggtatccggcggcgagctggagcgcgctttggcagcgggcatgaaggcggaagatatc
gtcttttccggcgtgggcaaaagcagtgctgagctgatgctgggtctcgacaagggcata
ggccagtttaatctcgagtccgaggaagaaggccagatgctggccgaaattgcggcggcg
cgcggagaacaggctccggccaccttgcgcgtcaatcccgatgtcgatgccgggacccat
gcaaaaatttccaccggcaaggcggagaataaattcggcgtcgcgatcgatgtcgcgccc
gatatttttgcgcgtctgtccaaactggacggcctgaacctgcgcggtgtggccgtgcat
attggcagccagctgcaaaagctagacccgcttgagaaatgctatacgcgcatgggacaa
ctggtcagcgatctgcgtgccgccggtcacaccatcacccatgtcgatctcggcggcggt
cttggcgtgccttacaagcccgaagaaagccctcccagcccggcggattacggcgccatg
attgcgcgcgtgacccagggctgggacgtcacgctgatgtttgaacccggccgggtcatt
gccggcaatagcggcgtcatgatgacgcaggtcatccgcatcaaacccggcgtgaacagc
gattttgtgattgtcgacgcggcgatgaacgatctgatgcgacctgccatctatgatgct
tggcaccatttcgaggccgtgcgaccgaccggtgaaaccatgaccgcatcgattgtcggc
ccaatttgcgagagcagcgatatatttgccaaagaacgcgacgttgaccgggtgcaaacc
gatgatttcggcatattccggaccgctggtgcctatggcgcgaccatggccaacacctat
aacagccggccattggtccccgaagtgctggttgatggtaataaatttgcggtggtggcc
gagcggattgaaccagcgacgatcatggccgccgaacatgtgccggactggttgaaataa
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