Parasphingorhabdus cellanae: J4G78_14230
Help
Entry
J4G78_14230 CDS
T07111
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
parj
Parasphingorhabdus cellanae
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_14230
Enzymes [BR:
parj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
J4G78_14230
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
J4G78_14230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QTD55356
LinkDB
All DBs
Position
complement(2956188..2957717)
Genome browser
AA seq
509 aa
AA seq
DB search
MSKKTLIPILGDQLSLDISSLTDQQPDTSVLLMMEVEAEATYVKHHKAKIAYIFSAMRHH
ASALRERGWTVDYVALDDTDNSGSFTGEVARACERHDIESIRITEAGEWRVMAMIENWED
QFDVPVTICPDQRFIATHQEFEHWAEGKKQLRMEFFYREMRRKTGLLLDKDGKPEGGKWN
YDAENRKPAKSDLMMPQPIRFQPDQITQDVIDLVTERFADHPGSLEQFHFAVTHEEALRQ
RRKFLDHALAQFGDYQDAMLTGEPFLWHSILSPYLNSGLLDPLALCQEVADLYAGGKVPL
NAAEGFIRQIIGWREYVRGIYWREGPDYAQRNFLDAQHPLPDFYYNGETDMLCLSEAIGQ
TLDLAYAHHIQRLMITGNFALIAGIDPHAVHEWYLEVYADAYEWVELPNTLGMSQFGDGG
IIASKPYASSGNYINKMSDHCASCAYDVKQRTGDEACPFNALYWDFLARNEDKLADNNRL
AMPYRTWNKMDSDVQKQLRASAKAFLERL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaaaacgctcattccaatacttggtgaccaactatcattggatatctcgtcc
cttactgatcaacagcccgatacatctgttctattgatgatggaggtcgaagccgaagcc
acctacgtaaaacatcacaaagccaagattgcctacatattttcggccatgcggcaccat
gcctcagcattgcgcgaacgcggctggaccgttgattatgtggcgctcgatgataccgat
aatagcggcagctttaccggcgaagtcgcccgcgcttgcgaacggcacgacatcgaatct
attcgcattaccgaagctggcgaatggcgggtcatggcgatgattgaaaactgggaagac
cagtttgatgttccggttaccatctgccccgatcagcgctttatcgccacccatcaggaa
tttgaacattgggcagaaggcaaaaagcaactgcggatggagtttttctatcgcgagatg
cgccgcaagacaggattgttgctggacaaggatggcaaaccggaaggcggaaaatggaat
tatgacgcggaaaatcgcaagcccgcgaaaagcgacttgatgatgccgcaaccaatccgc
tttcaaccggaccaaattacgcaggacgtgattgatttggtcacagagagatttgcagac
catcccggttcactcgagcaatttcatttcgccgtgacccatgaggaagcgttgcgccaa
cggcgtaagtttctggaccatgcccttgcccaatttggcgattatcaggatgccatgctg
accggtgagccgttcctctggcattctatcctttcaccctatctcaatagcggcctgctt
gatccactagctctctgccaggaagtggccgatctatatgcgggtggcaaggtgcctctt
aacgccgctgagggtttcattcgtcagataatcggctggcgtgaatatgtccgcggtatc
tattggcgcgaagggccagactatgcacagcgaaattttctggatgcccaacatcctctt
cccgatttttattataacggcgagaccgacatgctatgtttgtcggaagcaataggacag
acactagaccttgcttatgcccatcatatccagcggcttatgatcacgggcaattttgca
ctaattgcagggattgatccccacgcggttcatgaatggtacctggaagtttatgctgat
gcttatgagtgggtcgaactccccaatacattggggatgagccaatttggtgatggtgga
attatcgcctcaaagccatacgcctcgtcgggcaattatataaacaaaatgtccgatcat
tgtgcatcttgcgcttatgacgtgaaacagcgcaccggcgacgaagcctgcccattcaac
gcgctttactgggattttcttgcgcgaaacgaggacaagcttgccgataataaccgcttg
gcaatgccctatcgcacgtggaataaaatggattccgacgtccagaaacagcttcgcgcc
agcgcaaaagcctttctggaacggttgtaa
DBGET
integrated database retrieval system
