Parasphingorhabdus cellanae: J4G78_14460
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Entry
J4G78_14460 CDS
T07111
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4G78_14460 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parj03019
]
J4G78_14460 (recQ)
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_14460 (recQ)
Enzymes [BR:
parj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4G78_14460 (recQ)
Messenger RNA biogenesis [BR:
parj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4G78_14460 (recQ)
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4G78_14460 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
Flavodoxin_1
Motif
Other DBs
NCBI-ProteinID:
QTD55395
LinkDB
All DBs
Position
complement(3003464..3005251)
Genome browser
AA seq
595 aa
AA seq
DB search
MIENLLPLLKSTFGFNALRGVQDQVITRVMDRQNTLTVMPTGAGKSLCYQLPAIANEGTV
VVISPLIALMHDQLRSAEAVGIRAATLTSADDNRAETIARLKAGELDLLYAAPERASGEH
FRNLLEQTRISLFAIDEAHCVSEWGHDFRPDYRLLRPLLDHFSHVPRLALTATADAHTRD
DILVQLGIEQDGLIIAGFDRPNIRYSISPRKGLTRQVADLVERIPGPGIIYATTRNATEK
IADQIARTGRSARAYHAGLPPEIRQRNQADFVASEDMVMVATIAFGMGIDKPDVRFVAHA
GLPKSIEAYYQETGRAGRDGDPAEAHMFWGAEDFAKARQRLTEVDEQRLSSERTRLAALG
GLVEAAGCRRAILLKHFGEEPPKSCGNCDNCLNAPITRNVTELARKFLSAVYRTGQSFGV
GHLEAVLTGKQEDKVLSRGHDRLSVFDIVDGEEAPLIKPVSRSLLLRDALRNTEHGGLMF
GPEARAILKGEAEVAIVEPPKRERKKRRSGSSPNPVGDPLFDALRAKRMELAKEQGVPPY
VIFHDSVLRDMTGFKPRSLSALAELPGIGAAKLEKYGDPFLTVIQQVTEAQEESV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatctcttaccgctgctgaaatcaacctttgggttcaatgcacttcgcggc
gtgcaggatcaggtaattacgcgcgtgatggaccggcagaatacactgaccgtgatgcca
accggcgctggcaagtctttatgttaccaactcccggcgattgccaatgaaggcacggta
gtcgtgatctctccattaatcgcgttgatgcacgatcaactgcggagcgccgaagcggtg
ggcatccgggcggcaaccttgacctcggctgatgacaatcgcgccgaaactattgcccgt
ctgaaagcaggcgagctggacctgctctacgcggctccagaacgcgcctccggtgagcat
ttccgcaatctgctggaacagaccaggatttcactgtttgcgattgatgaagcgcattgc
gtatcggaatggggacatgacttccggcctgattaccgactgctgcgccccttgctagat
cattttagccacgtgccgcgcctcgcgctaacagccaccgcagatgcccatactcgcgat
gatatcttggtccagctcggtatcgaacaagacggtttgattattgccggttttgaccgc
cccaacatccgttacagtatttcgccgcgcaaaggcctgacccggcaagtcgccgatctc
gttgagcgcattccaggacctggcattatctacgcgacaactcgcaacgcaaccgagaaa
atagcggatcagattgctcggactggccgcagcgcgcgcgcctaccatgctggactcccg
cccgaaatccggcaacgtaatcaagcagattttgtcgcctcggaagacatggtgatggtg
gcgaccattgctttcggtatgggaatcgacaaacctgatgtgcgctttgtagcgcatgcc
ggtctacccaaatccattgaggcctattatcaagaaaccggccgcgcagggcgtgatggc
gatcccgcagaagcgcatatgttctggggcgccgaagattttgccaaagcgcgacaaagg
ctgacagaagttgacgagcagcggttgagcagcgaacggacgaggttggcagccctcggc
ggactagtcgaggcagcgggatgccgccgggcgatattgctgaaacattttggcgaagag
cctcccaaaagctgcggcaattgcgacaattgtctgaacgcaccaattacccgcaatgtc
acagagcttgcgcgcaagtttctatctgccgtttatcgcactggtcagagtttcggtgtc
ggccatctcgaagctgtcctgaccggcaagcaggaagataaagttctatcacgcgggcat
gaccggttatcggtctttgacattgttgatggcgaagaagcgccgctcatcaaaccagtc
tcgcgctcgttgttgctgcgcgatgcgctgcgcaataccgagcatggcgggctcatgttc
gggccagaagcgcgcgcgatattgaaaggcgaagcggaggttgcgattgtcgagccgccc
aaacgtgaacgtaagaaacggcgcagcggttcttctcccaatccggttggcgacccgctg
tttgatgccttgcgggccaagcggatggagctcgccaaggaacaaggcgtgccgccctat
gtaattttccacgacagcgtattacgtgacatgacgggcttcaaaccgcgcagcctgtct
gcgctagcggagctccccggaattggcgcagcgaagcttgaaaaatatggcgacccgttt
ctgaccgtgattcagcaggttaccgaagcgcaggaggaaagcgtgtga
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