Parasphingorhabdus cellanae: J4G78_15970
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Entry
J4G78_15970 CDS
T07111
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
parj
Parasphingorhabdus cellanae
Pathway
parj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
parj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4G78_15970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parj03021
]
J4G78_15970
03400 DNA repair and recombination proteins [BR:
parj03400
]
J4G78_15970
Enzymes [BR:
parj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4G78_15970
Transcription machinery [BR:
parj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4G78_15970
DNA repair and recombination proteins [BR:
parj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4G78_15970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QTD55673
LinkDB
All DBs
Position
3314898..3315956
Genome browser
AA seq
352 aa
AA seq
DB search
MTVNMKNWQELKKPNVLDIKSGGDPKRKATFVAEPLERGFGLTIGNALRRVLLSSLQGAA
VTSIKIENALHEFSSLPGVREDVTDIVLNVKQIALKMEGEDAKRLQLSATGPAEVTAGDI
AVSGDIEVMNPDLVICHLDEGASFNMELTVNVGKGYVPAVANRPADAPIGLIPVDSLYSP
IRQVSYKVDNARVGQELDFDKLNLTIDTDGTVTPEDAIAYAARILQDQLQLFVHFEEALE
SVSSPIGMAAAQSQQESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEA
EMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaatatgaagaactggcaagaactgaagaagcccaatgttctcgatataaaa
tccggtggtgatcccaagcgcaaagctactttcgtagcggaacctcttgagcgcggcttt
ggcttgaccattggtaacgcactacgtcgcgttttgctgtcatcgctgcaaggcgctgcg
gttacctcgatcaaaatcgaaaacgccctgcatgaattttcgtcgcttccgggcgtacgt
gaagatgtcaccgacattgttttgaacgtcaaacagattgctctgaagatggaaggtgaa
gatgccaagcgtctgcagctttccgcaacgggtcctgcagaagtcaccgcaggtgacatc
gccgtttccggcgacatcgaagtgatgaacccggatctggtcatctgtcaccttgatgaa
ggcgcgtcgttcaacatggaactgaccgtcaatgttggcaaaggctatgttccagcggtt
gctaaccgtcccgcagacgcgccaatcggcttgatcccggttgactcgctttattcgcca
atccgtcaggtttcctacaaagtcgacaatgcccgcgttggtcaggagctcgactttgac
aagctgaacctcaccatcgacaccgacggcaccgtgaccccggaagatgcgattgcctat
gcagcccgcattcttcaggaccagttgcagctgttcgtgcatttcgaagaagctttggaa
agcgtatcatcgcccatcggcatggccgcagcacagagccagcaggaaagcgatgccaac
cagctcaaccgttaccttctcaagaaggtcgacgagttggaactgtccgtccgctcggca
aactgcctcaagaacgacaatatcatctatattggcgatctggtgcagaagaccgaagcc
gaaatgctgcgcacgccgaactttggtcgcaagtccttgaacgaaatcaaggaagtgctg
tccagcatgggtctgcgtctgggaatggatattcctggctggccgcccgaaaatatcgaa
gaaatggccaagaagcttgagcaagagctgctgggttaa
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