Paralcaligenes sp. KSB-10: LSG25_00835
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Entry
LSG25_00835 CDS
T07761
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LSG25_00835 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_00835 (xseA)
Enzymes [BR:
park01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LSG25_00835 (xseA)
DNA repair and recombination proteins [BR:
park03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LSG25_00835 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UHL64497
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All DBs
Position
179509..180858
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AA seq
449 aa
AA seq
DB search
MYTDNPVLARDPILSVSQLNQQVGQLLAGHFSQIWVRGEISNFTQAASGHWYFTIKDERS
AVRAVMFRGRAQSVGFVPKAGERFEFRASVTLYEARGDYQLQVEALRRAGRGDLHEAFLM
LKDKLAAEGLFDADRKRPIKTMPRAIGVVTSLAAAALHDVLSAMARRAPHVQVIVYPAPV
QGQDAAGKLRQSLSVACERNEVDTLLLVRGGGSLEDLWSFNDEALARLIASSPIPVISGV
GHETDFTIADFVADLRAPTPTAAAELCCQARQECLAQVRSALATLTAQQHRLLERAALRL
DRAVAMLASPQQRLAQQGERLQVLMNRLVRVATGLSERPAARLGQLQGRLAHAEPDVVRR
RHDLGQYASRLSRSGQGMLVRQQARLAAAAQTLEALNPRKILGRGYAIVRNQQGALVKDA
SALSPGEHLQLELSQGGAEVAVLQAHGLI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtatacagataatccggttttagctcgcgatcccatcctgtcggtgtcccaactcaac
cagcaggtcgggcagttgctcgccgggcatttttcgcaaatatgggtaaggggggagata
tcgaactttacccaggcggcgtcggggcattggtactttacgatcaaggatgagcgatcc
gccgtacgggctgtcatgtttcgtggccgggcccagagtgtgggttttgtgccaaaggcc
ggggaacgattcgaatttcgcgccagcgtgactttgtacgaggcccgcggcgactatcag
ttgcaggtcgaagcgctgaggcgcgccggccggggtgacctgcatgaagcttttttaatg
ctcaaggacaagttggcggccgaaggcctgttcgatgcggatcgcaagcgtccgatcaaa
accatgcctcgcgcaatcggcgtggtcacctcgctggccgcggcagccttgcacgacgtc
ctgtcggccatggcgcgccgcgcgccgcacgttcaggttattgtctatccggcgccggtg
cagggccaggatgccgccgggaaactcaggcagtcgctgagcgtcgcctgtgagcgtaat
gaagtcgacacgctgcttttggtgcggggagggggcagcctcgaggacctctggagcttc
aacgatgaggcgctggcccgcctgattgcgtccagccccattcccgtgatcagcggcgtt
ggccacgaaaccgattttacgattgccgattttgtggccgatttgcgtgcgcccaccccc
acggccgcggccgagctttgctgccaggctcgccaggagtgcctggcccaggtccggtcg
gcgctggcgacgctgacggcacagcagcatcgcttgctggagcgtgccgccttgcggctg
gatcgggcggtggccatgctggcctcgccgcagcagcgcctggcgcagcagggtgagcgt
ttgcaggttttgatgaatcgtttggtgcgcgtggccaccggtttgtccgaacgccccgcg
gcgcgtctgggtcagttgcaaggccgcctggctcacgccgaacccgacgtcgttcgccga
cggcatgatctgggccagtacgcctcgcgcctgtcgcgttccgggcaaggcatgctggtg
cggcaacaggcgcgattggcggcggccgctcaaaccctcgaagccttgaatcccagaaaa
atacttggccgcggctacgccatcgtgcgcaaccagcagggtgcgttggtaaaagatgca
agtgccttgagccccggcgagcatctgcagctggaattgagtcaaggcggagcggaggtt
gcggttctgcaggcacatggactaatctaa
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