Paralcaligenes sp. KSB-10: LSG25_02010
Help
Entry
LSG25_02010 CDS
T07761
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LSG25_02010
09124 Replication and repair
03420 Nucleotide excision repair
LSG25_02010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
park03021
]
LSG25_02010
03036 Chromosome and associated proteins [BR:
park03036
]
LSG25_02010
03400 DNA repair and recombination proteins [BR:
park03400
]
LSG25_02010
Enzymes [BR:
park01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LSG25_02010
Transcription machinery [BR:
park03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LSG25_02010
Chromosome and associated proteins [BR:
park03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LSG25_02010
DNA repair and recombination proteins [BR:
park03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LSG25_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UHL64705
LinkDB
All DBs
Position
complement(442122..444398)
Genome browser
AA seq
758 aa
AA seq
DB search
MKYTVAVRTLCEFTAKQGDLDLRFTPSPTAREGIAGHALVASRRGADYQSEISLAGEFQH
LTVRGRADGYDPVQNQLEEIKTFRGELASMPANHRYLHWAQVKVYGHLLCEKLGLPELRL
ALVYFDIVAKQETVLNELYSAATLKKGFESQCRQFLDWAAQELAHRVNRDHALDGLRFPY
AQFRTGQRPLSVAVYKAARSGLCLAAQAPTGIGKTVGTLFPLLKAAPAAQLDKLFFLTAK
TSGRNIALNALAQIRNMNSGTPLRIIELVARDKACEHPDKACHGASCPLALGFYDRLPAA
RQAALDTACLDKQALRRIASEHRVCPYYLGHELVRWCDVVVGDFNYYFDSSAMLHGLTVA
NQWRVGLLVDEAHNLIERARKMYTAELEQAALTALRRSAPPALKKTLGSVSRCWNELLKN
QPAPYQTYNGVPAKFIAALQRAAAAIIDYQTDNPTHADSSLQRFYFDALHFLHIAELFDT
HSLFDIAVPAACGGAAGQQSVLCLRNIIPAPFLAPRFNAAHCTTLFSATLTPRRFYSDIL
GLPPDSAWIDVESPFRPEQLTVQVARRISTRYQHREASLQPMADLMAMQYSKQPGNYLIF
LSSFDYLRQLSALFKSRHPGIPIWEQARHMDETEREAFLERFTEAGRGFGFAVLGGAFAE
GIDLPGQRLIGAFIATLGLPQINPANEQIRERMGMAFGGGYEYAYLYPGIRKVVQAAGRV
IRTQSDQGVVYLMDDRFNRPQVRGLLPKWWRVTCLEPG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataccgttgccgtgcgaaccctgtgcgagttcacggccaaacaaggcgacctc
gatctgcgttttactccctcgcccaccgcgcgggaaggcatcgccggccatgcactggtt
gcgtcgcgccgtggcgccgattatcaatcggaaataagtcttgccggggaatttcagcac
cttactgtccgcggccgcgccgacggatacgatccggtgcaaaaccagctcgaggaaatc
aagacattccgtggcgaactggcctccatgcccgccaatcaccgctacttgcattgggcc
caagtcaaagtctatgggcacctgctatgcgaaaagctgggtttgccggaactcaggctg
gcattggtttattttgacatcgtcgccaagcaggaaaccgtattgaacgaactgtacagc
gccgcaacgctcaaaaagggtttcgaaagccaatgccggcaatttctggactgggccgcc
caagaactggcccaccgtgtcaaccgcgaccacgcgctggacggcctgcgctttccgtat
gcccaattccgcaccggccagcggcctttgtccgtagcagtatataaggcggcgcgcagc
ggcctatgcctggcggctcaggctccgaccggcataggcaagactgtaggcactctgttt
cctcttctgaaagccgcccccgccgcgcaactggacaagctgttcttcctgaccgcaaag
acttcgggccgcaatatcgccttgaacgccttggcgcaaatccggaacatgaactccggc
acgccgctgcgcatcatcgagctcgtcgcccgggacaaggcctgcgaacacccggacaag
gcttgccatggcgcatcctgtcctttggccctggggttctacgacaggctgccggcagcg
cgccaggcggcgctcgacacagcatgcctggacaagcaggcactgcgccggatcgcttcc
gaacatcgagtatgcccttattatctgggccacgaattggtgcgttggtgcgacgtggtg
gttggcgatttcaattattatttcgactcgagcgccatgctgcatggcttgaccgtcgcc
aatcaatggcgtgtgggactactggtcgacgaagcgcacaacctgatcgagcgcgcccgc
aaaatgtatacggccgagctcgagcaggcggccctcacggcactgcgccgctcggcgccg
ccggcgctgaaaaaaaccttgggcagcgtcagccgctgctggaatgagctgctgaaaaac
cagcccgctccttaccagacgtacaacggcgttccggcaaaattcatcgccgcgctgcag
cgggctgccgcagccatcatcgattaccagaccgacaaccccactcatgccgatagctcc
ttgcagcgtttttacttcgatgctctgcatttcctgcatatcgccgagctgttcgatact
cattccctgttcgatattgccgtgcctgcggcctgcgggggcgccgcaggccaacagtcg
gtattgtgcttgcgcaacatcatccccgcccccttcctcgcaccccggttcaacgcagct
cattgcacaacgctgttctcggccacactgactccccggcgtttctacagcgacatactg
ggcttgccgcccgacagcgcatggatcgacgtggagtcgcctttcaggcccgagcaactg
acagtccaggtcgcccgccgcatctcgacccgctaccagcaccgcgaagcatccttgcag
cccatggccgacttgatggccatgcaatacagcaagcagcctggcaactatcttatattc
ctgagcagttttgattacctgcggcaactgtccgccctgttcaaaagccgccaccccggg
atccccatatgggagcaggcgcggcatatggacgaaaccgagcgcgaggcgtttctggaa
cgcttcacggaggctggacgcggtttcggatttgccgtcttgggcggcgccttcgccgaa
ggcatcgacttgcccgggcaaagactgataggcgctttcattgcgaccctcggactgcct
cagatcaatccggccaatgaacagatacgggagcgcatgggcatggcctttggtggaggc
tatgaatacgcctacctgtacccgggtatccgtaaagtggtgcaagccgccgggcgcgtg
atccgcacacaatcagaccagggtgtggtgtacctcatggacgaccgtttcaatcggccg
caggtgcgcggcctgctgccgaagtggtggcgtgtgacatgccttgagccgggctga
DBGET
integrated database retrieval system
