KEGG   Paralcaligenes sp. KSB-10: LSG25_04460
Entry
LSG25_04460       CDS       T07761                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
park  Paralcaligenes sp. KSB-10
Pathway
park03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:park00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LSG25_04460 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:park03019]
    LSG25_04460 (orn)
   03009 Ribosome biogenesis [BR:park03009]
    LSG25_04460 (orn)
Messenger RNA biogenesis [BR:park03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LSG25_04460 (orn)
Ribosome biogenesis [BR:park03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    LSG25_04460 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: UHL65161
LinkDB
Position
complement(975647..976192)
AA seq 181 aa
MAVNAQRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVIHQNDALLDGMDK
WNQSTHGKSGLIDKVKASTLTEEQAEEQLLAFLSQHVPAGKSPLCGNTISQDRRFMVKYM
PRLEAYFHYRNLDVSTLKELSLRWKPEVYKSFVKKSRHEALADIYESIDELKHYREHFIK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atggcggttaatgctcagcgtttggtatggctcgacatggaaatgacggggctggatccg
gaaaaagaacgcattatcgaagtggcggtagtggtgacggagccggatctgaccgtggtg
gcggaaggtccggtattggttatacatcagaacgatgccctgcttgacggcatggacaaa
tggaatcagtccacccacggtaaaagcgggctgatcgacaaggtcaaggcttcgacgctt
accgaagagcaggccgaagaacaactgctggcctttctgagccagcatgttcctgccggc
aaatcgcctttatgcggcaacaccatcagccaggatcggcgcttcatggtcaagtatatg
ccgcgcctggaggcttattttcattatcgcaatctggatgtcagtacgctcaaggaactg
tccctgcgctggaagccggaagtttataaaagcttcgtcaagaaaagccgccatgaagcg
ctggccgatatttacgagtctatcgacgagctcaagcattatcgcgaacatttcatcaag
ctatga

DBGET integrated database retrieval system