Paralcaligenes sp. KSB-10: LSG25_04460
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Entry
LSG25_04460 CDS
T07761
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
park
Paralcaligenes sp. KSB-10
Pathway
park03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
park00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LSG25_04460 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
park03019
]
LSG25_04460 (orn)
03009 Ribosome biogenesis [BR:
park03009
]
LSG25_04460 (orn)
Messenger RNA biogenesis [BR:
park03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LSG25_04460 (orn)
Ribosome biogenesis [BR:
park03009
]
Eukaryotic type
Pre-60S particles
RNases
LSG25_04460 (orn)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UHL65161
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All DBs
Position
complement(975647..976192)
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AA seq
181 aa
AA seq
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MAVNAQRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVIHQNDALLDGMDK
WNQSTHGKSGLIDKVKASTLTEEQAEEQLLAFLSQHVPAGKSPLCGNTISQDRRFMVKYM
PRLEAYFHYRNLDVSTLKELSLRWKPEVYKSFVKKSRHEALADIYESIDELKHYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaatgctcagcgtttggtatggctcgacatggaaatgacggggctggatccg
gaaaaagaacgcattatcgaagtggcggtagtggtgacggagccggatctgaccgtggtg
gcggaaggtccggtattggttatacatcagaacgatgccctgcttgacggcatggacaaa
tggaatcagtccacccacggtaaaagcgggctgatcgacaaggtcaaggcttcgacgctt
accgaagagcaggccgaagaacaactgctggcctttctgagccagcatgttcctgccggc
aaatcgcctttatgcggcaacaccatcagccaggatcggcgcttcatggtcaagtatatg
ccgcgcctggaggcttattttcattatcgcaatctggatgtcagtacgctcaaggaactg
tccctgcgctggaagccggaagtttataaaagcttcgtcaagaaaagccgccatgaagcg
ctggccgatatttacgagtctatcgacgagctcaagcattatcgcgaacatttcatcaag
ctatga
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